Experiment: K25
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04236 and ECD_04237 are separated by 253 nucleotides ECD_04237 and ECD_04238 are separated by 48 nucleotides ECD_04238 and ECD_04239 are separated by 2 nucleotides ECD_04239 and ECD_04240 are separated by 106 nucleotides
ECD_04236: ECD_04236 - OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane-bound) and II (soluble), at 4,515,525 to 4,517,816
_04236
ECD_04237: ECD_04237 - putative DUF2501 family periplasmic protein, at 4,518,070 to 4,518,564
_04237
ECD_04238: ECD_04238 - DNA biosynthesis protein, at 4,518,613 to 4,519,350
_04238
ECD_04239: ECD_04239 - DNA biosynthesis protein (primosomal protein I), at 4,519,353 to 4,519,892
_04239
ECD_04240: ECD_04240 - DUF3815 family inner membrane protein, at 4,519,999 to 4,520,472
_04240
Position (kb)
4518
4519
4520 Strain fitness (log2 ratio)
-1
0
1
2 at 4517.630 kb on + strand at 4517.632 kb on + strand at 4517.632 kb on + strand at 4517.632 kb on + strand at 4517.633 kb on - strand at 4517.669 kb on - strand at 4517.691 kb on - strand at 4517.691 kb on - strand at 4517.695 kb on - strand at 4517.695 kb on - strand at 4517.747 kb on + strand at 4517.747 kb on + strand at 4517.747 kb on + strand at 4517.747 kb on + strand at 4517.748 kb on - strand at 4517.768 kb on - strand at 4517.768 kb on - strand at 4517.806 kb on - strand at 4517.806 kb on - strand at 4517.832 kb on - strand at 4517.879 kb on + strand at 4517.880 kb on - strand at 4518.049 kb on + strand at 4518.215 kb on + strand, within ECD_04237 at 4518.323 kb on + strand, within ECD_04237 at 4518.354 kb on + strand, within ECD_04237 at 4518.355 kb on - strand, within ECD_04237 at 4518.355 kb on - strand, within ECD_04237 at 4518.355 kb on - strand, within ECD_04237 at 4518.364 kb on + strand, within ECD_04237 at 4518.364 kb on + strand, within ECD_04237 at 4518.394 kb on - strand, within ECD_04237 at 4518.394 kb on - strand, within ECD_04237 at 4518.394 kb on - strand, within ECD_04237 at 4518.397 kb on + strand, within ECD_04237 at 4518.398 kb on - strand, within ECD_04237 at 4518.398 kb on - strand, within ECD_04237 at 4518.512 kb on - strand, within ECD_04237 at 4518.549 kb on + strand at 4518.593 kb on + strand at 4518.594 kb on - strand at 4518.614 kb on + strand at 4518.614 kb on + strand at 4518.615 kb on - strand at 4519.942 kb on - strand at 4519.945 kb on - strand at 4520.029 kb on + strand at 4520.029 kb on + strand at 4520.163 kb on + strand, within ECD_04240 at 4520.166 kb on - strand, within ECD_04240 at 4520.166 kb on - strand, within ECD_04240 at 4520.251 kb on - strand, within ECD_04240 at 4520.271 kb on + strand, within ECD_04240 at 4520.271 kb on + strand, within ECD_04240 at 4520.272 kb on - strand, within ECD_04240 at 4520.272 kb on - strand, within ECD_04240 at 4520.272 kb on - strand, within ECD_04240 at 4520.272 kb on - strand, within ECD_04240 at 4520.281 kb on - strand, within ECD_04240 at 4520.341 kb on + strand, within ECD_04240
Per-strain Table
Position Strand Gene LocusTag Fraction K25 remove 4,517,630 + -0.9 4,517,632 + +0.9 4,517,632 + -0.1 4,517,632 + +0.4 4,517,633 - -0.7 4,517,669 - +0.7 4,517,691 - +0.2 4,517,691 - -0.3 4,517,695 - -1.3 4,517,695 - -0.3 4,517,747 + +0.8 4,517,747 + +0.4 4,517,747 + -0.1 4,517,747 + -0.1 4,517,748 - +0.0 4,517,768 - -0.0 4,517,768 - +0.6 4,517,806 - -0.3 4,517,806 - -1.5 4,517,832 - -0.9 4,517,879 + +1.4 4,517,880 - +0.4 4,518,049 + -0.1 4,518,215 + ECD_04237 0.29 -0.5 4,518,323 + ECD_04237 0.51 +0.0 4,518,354 + ECD_04237 0.57 -0.6 4,518,355 - ECD_04237 0.58 +0.1 4,518,355 - ECD_04237 0.58 -0.9 4,518,355 - ECD_04237 0.58 +0.1 4,518,364 + ECD_04237 0.59 +1.8 4,518,364 + ECD_04237 0.59 -0.6 4,518,394 - ECD_04237 0.65 +0.1 4,518,394 - ECD_04237 0.65 +0.0 4,518,394 - ECD_04237 0.65 +0.7 4,518,397 + ECD_04237 0.66 +0.5 4,518,398 - ECD_04237 0.66 +0.2 4,518,398 - ECD_04237 0.66 +0.1 4,518,512 - ECD_04237 0.89 -0.1 4,518,549 + +1.4 4,518,593 + -0.2 4,518,594 - +2.1 4,518,614 + -0.1 4,518,614 + +1.0 4,518,615 - +0.1 4,519,942 - +0.4 4,519,945 - -0.6 4,520,029 + -0.1 4,520,029 + -0.6 4,520,163 + ECD_04240 0.35 -1.3 4,520,166 - ECD_04240 0.35 +1.3 4,520,166 - ECD_04240 0.35 +0.8 4,520,251 - ECD_04240 0.53 +0.6 4,520,271 + ECD_04240 0.57 +0.3 4,520,271 + ECD_04240 0.57 +0.1 4,520,272 - ECD_04240 0.58 -1.5 4,520,272 - ECD_04240 0.58 -0.5 4,520,272 - ECD_04240 0.58 +0.3 4,520,272 - ECD_04240 0.58 -0.0 4,520,281 - ECD_04240 0.59 -0.2 4,520,341 + ECD_04240 0.72 -0.1
Or see this region's nucleotide sequence