Strain Fitness in Escherichia coli BL21 around ECD_00567

Experiment: K25

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00566 and ECD_00567 are separated by 9 nucleotidesECD_00567 and ECD_00568 are separated by 108 nucleotides ECD_00566: ECD_00566 - DUF466 family protein, at 592,658 to 592,855 _00566 ECD_00567: ECD_00567 - putative oxidoreductase, at 592,865 to 593,953 _00567 ECD_00568: ECD_00568 - methionine aminotransferase, PLP-dependent, at 594,062 to 595,222 _00568 Position (kb) 592 593 594Strain fitness (log2 ratio) -1 0 1 2at 591.961 kb on + strandat 591.962 kb on - strandat 592.003 kb on - strandat 592.102 kb on + strandat 592.102 kb on + strandat 592.258 kb on + strandat 592.260 kb on + strandat 592.260 kb on + strandat 592.326 kb on + strandat 592.362 kb on + strandat 592.418 kb on - strandat 592.475 kb on - strandat 592.688 kb on + strand, within ECD_00566at 592.739 kb on + strand, within ECD_00566at 592.739 kb on + strand, within ECD_00566at 592.740 kb on - strand, within ECD_00566at 592.740 kb on - strand, within ECD_00566at 592.740 kb on - strand, within ECD_00566at 592.740 kb on - strand, within ECD_00566at 592.751 kb on - strand, within ECD_00566at 592.751 kb on - strand, within ECD_00566at 592.787 kb on + strand, within ECD_00566at 592.824 kb on - strand, within ECD_00566at 592.959 kb on - strandat 592.959 kb on - strandat 593.050 kb on - strand, within ECD_00567at 593.050 kb on - strand, within ECD_00567at 593.061 kb on - strand, within ECD_00567at 593.245 kb on + strand, within ECD_00567at 593.248 kb on + strand, within ECD_00567at 593.249 kb on - strand, within ECD_00567at 593.249 kb on - strand, within ECD_00567at 593.325 kb on - strand, within ECD_00567at 593.480 kb on - strand, within ECD_00567at 593.503 kb on + strand, within ECD_00567at 593.504 kb on - strand, within ECD_00567at 593.529 kb on + strand, within ECD_00567at 593.530 kb on - strand, within ECD_00567at 593.727 kb on - strand, within ECD_00567at 593.762 kb on - strand, within ECD_00567at 593.968 kb on - strandat 594.011 kb on - strandat 594.021 kb on + strandat 594.024 kb on - strandat 594.204 kb on + strand, within ECD_00568at 594.205 kb on - strand, within ECD_00568at 594.249 kb on - strand, within ECD_00568at 594.311 kb on + strand, within ECD_00568at 594.374 kb on + strand, within ECD_00568at 594.374 kb on + strand, within ECD_00568at 594.444 kb on - strand, within ECD_00568at 594.484 kb on + strand, within ECD_00568at 594.592 kb on + strand, within ECD_00568at 594.592 kb on + strand, within ECD_00568at 594.593 kb on - strand, within ECD_00568at 594.593 kb on - strand, within ECD_00568at 594.774 kb on - strand, within ECD_00568at 594.774 kb on - strand, within ECD_00568at 594.778 kb on + strand, within ECD_00568at 594.778 kb on + strand, within ECD_00568at 594.778 kb on + strand, within ECD_00568at 594.779 kb on - strand, within ECD_00568at 594.779 kb on - strand, within ECD_00568at 594.843 kb on + strand, within ECD_00568at 594.843 kb on + strand, within ECD_00568at 594.868 kb on - strand, within ECD_00568at 594.903 kb on + strand, within ECD_00568at 594.903 kb on + strand, within ECD_00568at 594.903 kb on + strand, within ECD_00568at 594.903 kb on + strand, within ECD_00568at 594.904 kb on - strand, within ECD_00568at 594.904 kb on - strand, within ECD_00568at 594.944 kb on + strand, within ECD_00568

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Per-strain Table

Position Strand Gene LocusTag Fraction K25
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591,961 + +0.0
591,962 - -0.1
592,003 - -0.4
592,102 + +0.4
592,102 + -1.0
592,258 + -0.3
592,260 + -1.1
592,260 + -0.2
592,326 + -0.1
592,362 + -1.0
592,418 - +0.1
592,475 - +1.0
592,688 + ECD_00566 0.15 -0.2
592,739 + ECD_00566 0.41 +0.8
592,739 + ECD_00566 0.41 +0.2
592,740 - ECD_00566 0.41 -0.3
592,740 - ECD_00566 0.41 +0.7
592,740 - ECD_00566 0.41 -0.4
592,740 - ECD_00566 0.41 -0.4
592,751 - ECD_00566 0.47 -0.3
592,751 - ECD_00566 0.47 +0.6
592,787 + ECD_00566 0.65 -0.6
592,824 - ECD_00566 0.84 +0.0
592,959 - +0.0
592,959 - +0.1
593,050 - ECD_00567 0.17 -0.4
593,050 - ECD_00567 0.17 -0.8
593,061 - ECD_00567 0.18 -0.5
593,245 + ECD_00567 0.35 -0.9
593,248 + ECD_00567 0.35 -1.0
593,249 - ECD_00567 0.35 -1.2
593,249 - ECD_00567 0.35 +0.1
593,325 - ECD_00567 0.42 +1.4
593,480 - ECD_00567 0.56 -0.4
593,503 + ECD_00567 0.59 -0.4
593,504 - ECD_00567 0.59 -0.5
593,529 + ECD_00567 0.61 -1.0
593,530 - ECD_00567 0.61 +0.2
593,727 - ECD_00567 0.79 +0.6
593,762 - ECD_00567 0.82 +0.4
593,968 - -1.6
594,011 - -0.7
594,021 + +0.6
594,024 - +0.1
594,204 + ECD_00568 0.12 -1.4
594,205 - ECD_00568 0.12 -0.4
594,249 - ECD_00568 0.16 -0.6
594,311 + ECD_00568 0.21 -0.7
594,374 + ECD_00568 0.27 +2.6
594,374 + ECD_00568 0.27 -0.2
594,444 - ECD_00568 0.33 -0.7
594,484 + ECD_00568 0.36 +0.4
594,592 + ECD_00568 0.46 -0.0
594,592 + ECD_00568 0.46 -0.5
594,593 - ECD_00568 0.46 +0.4
594,593 - ECD_00568 0.46 -0.4
594,774 - ECD_00568 0.61 +1.2
594,774 - ECD_00568 0.61 +0.3
594,778 + ECD_00568 0.62 +0.3
594,778 + ECD_00568 0.62 -0.1
594,778 + ECD_00568 0.62 +0.3
594,779 - ECD_00568 0.62 -0.7
594,779 - ECD_00568 0.62 +1.6
594,843 + ECD_00568 0.67 +0.2
594,843 + ECD_00568 0.67 -0.4
594,868 - ECD_00568 0.69 -1.2
594,903 + ECD_00568 0.72 +1.1
594,903 + ECD_00568 0.72 -1.3
594,903 + ECD_00568 0.72 +0.7
594,903 + ECD_00568 0.72 -0.3
594,904 - ECD_00568 0.73 +1.3
594,904 - ECD_00568 0.73 +0.6
594,944 + ECD_00568 0.76 -0.2

Or see this region's nucleotide sequence