Strain Fitness in Pseudomonas putida KT2440 around PP_4961

Experiment: 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.
5,652,620	-		PP_4961	0.15	-0.5
5,652,710	-		PP_4961	0.42	-0.8
5,652,960	+				-0.2
5,652,961	-				+2.7
5,652,961	-				+1.7
5,653,050	+				-1.4
5,653,050	+				+0.0
5,653,050	+				+0.1
5,653,051	-				-0.1
5,653,173	-		PP_4962	0.45	-0.3