Strain Fitness in Pseudomonas putida KT2440 around PP_2152

Experiment: 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO.

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO.
2,459,614	+				+2.4
2,459,767	-		PP_2152	0.27	+0.0
2,459,858	+		PP_2152	0.39	-0.7
2,459,904	+		PP_2152	0.46	-1.8
2,459,904	+		PP_2152	0.46	-1.0
2,460,279	+				+0.8
2,460,280	-				-2.2
2,460,388	+		PP_2153	0.13	-0.5
2,460,389	-		PP_2153	0.14	+0.4
2,460,389	-		PP_2153	0.14	+0.1
2,460,717	+		PP_2153	0.82	-0.2
2,460,717	+		PP_2153	0.82	-0.4
2,460,840	+				-0.4
2,460,840	+				+0.7
2,460,840	+				-0.5
2,460,871	+				+0.1
2,460,897	+				-0.9
2,460,897	+				+0.1