Strain Fitness in Pseudomonas putida KT2440 around PP_4964

Experiment: 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.
5,654,818	-		PP_4964	0.31	+1.7
5,654,824	-		PP_4964	0.32	-0.1
5,654,951	-		PP_4964	0.44	+2.7
5,655,007	+		PP_4964	0.49	+2.7
5,655,007	+		PP_4964	0.49	+2.7
5,655,007	+		PP_4964	0.49	+2.7
5,655,008	-		PP_4964	0.49	+2.7
5,655,008	-		PP_4964	0.49	+4.7
5,655,227	+		PP_4964	0.70	+2.7
5,655,228	-		PP_4964	0.70	+2.7
5,655,229	+		PP_4964	0.70	+2.7
5,655,229	+		PP_4964	0.70	-0.1
5,655,229	+		PP_4964	0.70	+2.7
5,655,230	-		PP_4964	0.70	+2.7
5,655,306	+		PP_4964	0.77	+2.7