Strain Fitness in Escherichia coli BW25113 around b2669

Experiment: LB Aerobic with Novobiocin 0.0000625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Aerobic with Novobiocin 0.0000625 mM
2,795,154	-				-1.7
2,795,289	-	ygaV	b2667	0.19	-0.1
2,795,295	+	ygaV	b2667	0.21	-0.5
2,795,330	-	ygaV	b2667	0.32	-0.4
2,795,372	+	ygaV	b2667	0.46	-2.7
2,795,374	+	ygaV	b2667	0.47	-0.1
2,795,380	-	ygaV	b2667	0.49	+0.3
2,795,380	-	ygaV	b2667	0.49	+0.0
2,795,384	+	ygaV	b2667	0.50	-0.5
2,795,386	-	ygaV	b2667	0.51	-1.3
2,795,388	+	ygaV	b2667	0.52	-0.8
2,795,390	-	ygaV	b2667	0.52	+0.1
2,795,401	-	ygaV	b2667	0.56	+0.6
2,795,409	+	ygaV	b2667	0.59	-1.5
2,795,413	+	ygaV	b2667	0.60	+0.0
2,795,423	+	ygaV	b2667	0.63	-0.3
2,795,423	+	ygaV	b2667	0.63	-0.3
2,795,431	+	ygaV	b2667	0.66	-0.7
2,795,434	+	ygaV	b2667	0.67	-1.3
2,795,437	-	ygaV	b2667	0.68	+1.0
2,795,439	+	ygaV	b2667	0.69	+1.6
2,795,439	+	ygaV	b2667	0.69	-2.4
2,795,441	+	ygaV	b2667	0.69	-0.9
2,795,449	-	ygaV	b2667	0.72	+0.0
2,795,449	-	ygaV	b2667	0.72	-1.3
2,795,449	-	ygaV	b2667	0.72	+1.0
2,795,449	-	ygaV	b2667	0.72	+0.0
2,795,449	-	ygaV	b2667	0.72	+1.0
2,795,450	-	ygaV	b2667	0.72	+1.0
2,795,458	-	ygaV	b2667	0.75	+1.0
2,795,460	-	ygaV	b2667	0.76	+0.0
2,795,460	-	ygaV	b2667	0.76	+1.0
2,795,460	-	ygaV	b2667	0.76	-0.3
2,795,497	+	ygaV	b2667	0.88	-0.6
2,795,497	+	ygaV	b2667	0.88	-1.5
2,795,508	+				-0.2
2,795,522	+				-0.4
2,795,522	+				-1.6
2,795,527	-				-1.0
2,795,527	-				-1.3
2,795,534	+				-0.5
2,795,534	+				-0.4
2,795,534	-				-1.8
2,795,534	-				+1.0
2,795,536	+				-0.6
2,795,539	+				-1.1
2,795,540	+				-0.6
2,795,542	-				-0.5
2,795,646	+	ygaP	b2668	0.20	-1.6
2,795,665	+	ygaP	b2668	0.23	-0.4
2,795,665	+	ygaP	b2668	0.23	-1.3
2,795,703	+	ygaP	b2668	0.31	-0.7
2,795,703	+	ygaP	b2668	0.31	-0.3
2,795,727	+	ygaP	b2668	0.35	-0.7
2,795,727	+	ygaP	b2668	0.35	-2.0
2,795,733	-	ygaP	b2668	0.36	+0.0
2,795,740	+	ygaP	b2668	0.38	+1.0
2,795,748	+	ygaP	b2668	0.39	+0.2
2,795,758	-	ygaP	b2668	0.41	+1.0
2,795,779	+	ygaP	b2668	0.45	-0.4
2,795,806	+	ygaP	b2668	0.50	-1.9
2,795,818	+	ygaP	b2668	0.53	-1.1
2,795,924	+	ygaP	b2668	0.73	+0.1
2,795,924	+	ygaP	b2668	0.73	-0.2
2,795,929	+	ygaP	b2668	0.74	+0.7
2,795,929	+	ygaP	b2668	0.74	+0.0
2,795,939	+	ygaP	b2668	0.76	-0.5
2,795,966	-	ygaP	b2668	0.81	-0.5
2,795,966	-	ygaP	b2668	0.81	+1.0
2,795,994	-	ygaP	b2668	0.86	+1.0
2,795,994	-	ygaP	b2668	0.86	+0.6
2,795,994	-	ygaP	b2668	0.86	+0.0
2,796,091	-				+0.1
2,796,097	+				+1.2
2,796,104	-				+1.1
2,796,104	-				+0.4
2,796,162	+	stpA	b2669	0.12	+1.1
2,796,172	+	stpA	b2669	0.15	+2.1
2,796,172	+	stpA	b2669	0.15	-0.9
2,796,174	+	stpA	b2669	0.15	-0.2
2,796,174	+	stpA	b2669	0.15	+2.1
2,796,174	+	stpA	b2669	0.15	-1.3
2,796,174	+	stpA	b2669	0.15	+1.6
2,796,178	+	stpA	b2669	0.16	-0.3
2,796,178	+	stpA	b2669	0.16	+1.1
2,796,178	+	stpA	b2669	0.16	-0.3
2,796,179	+	stpA	b2669	0.16	+0.1
2,796,179	+	stpA	b2669	0.16	+1.6
2,796,180	-	stpA	b2669	0.17	-1.1
2,796,180	-	stpA	b2669	0.17	-0.7
2,796,180	-	stpA	b2669	0.17	+0.6
2,796,180	-	stpA	b2669	0.17	+0.3
2,796,180	-	stpA	b2669	0.17	-0.5
2,796,180	-	stpA	b2669	0.17	+1.1
2,796,182	-	stpA	b2669	0.17	+2.2
2,796,182	-	stpA	b2669	0.17	-0.5
2,796,182	-	stpA	b2669	0.17	+0.7
2,796,182	-	stpA	b2669	0.17	+0.1
2,796,182	-	stpA	b2669	0.17	-1.1
2,796,182	-	stpA	b2669	0.17	-0.1
2,796,182	-	stpA	b2669	0.17	-1.0
2,796,182	-	stpA	b2669	0.17	-0.1
2,796,189	+	stpA	b2669	0.19	+2.1
2,796,197	-	stpA	b2669	0.21	+0.5
2,796,197	-	stpA	b2669	0.21	-0.8
2,796,201	-	stpA	b2669	0.22	-0.5
2,796,202	-	stpA	b2669	0.22	-0.8
2,796,203	-	stpA	b2669	0.22	+0.8
2,796,215	-	stpA	b2669	0.25	+0.9
2,796,215	-	stpA	b2669	0.25	+0.7
2,796,215	-	stpA	b2669	0.25	-1.1
2,796,266	+	stpA	b2669	0.38	+0.1
2,796,271	-	stpA	b2669	0.39	+1.3
2,796,271	-	stpA	b2669	0.39	-0.3
2,796,271	-	stpA	b2669	0.39	-0.8
2,796,276	-	stpA	b2669	0.40	+0.9
2,796,276	-	stpA	b2669	0.40	+0.7
2,796,276	-	stpA	b2669	0.40	-0.1
2,796,279	+	stpA	b2669	0.41	+1.1
2,796,281	-	stpA	b2669	0.41	+1.2
2,796,281	-	stpA	b2669	0.41	-1.1
2,796,290	-	stpA	b2669	0.44	-1.1
2,796,290	-	stpA	b2669	0.44	+0.1
2,796,326	-	stpA	b2669	0.53	-0.6
2,796,326	-	stpA	b2669	0.53	-0.2
2,796,326	-	stpA	b2669	0.53	-0.4
2,796,326	-	stpA	b2669	0.53	+0.4
2,796,326	-	stpA	b2669	0.53	-0.5
2,796,329	-	stpA	b2669	0.53	-1.1
2,796,331	+	stpA	b2669	0.54	+0.1
2,796,336	-	stpA	b2669	0.55	-0.7
2,796,336	-	stpA	b2669	0.55	+1.5
2,796,336	-	stpA	b2669	0.55	+1.5
2,796,336	-	stpA	b2669	0.55	-1.5
2,796,339	-	stpA	b2669	0.56	-0.3
2,796,364	-	stpA	b2669	0.62	+0.3
2,796,364	-	stpA	b2669	0.62	+0.2
2,796,365	-	stpA	b2669	0.62	-0.1
2,796,365	-	stpA	b2669	0.62	+1.3
2,796,369	-	stpA	b2669	0.63	+0.2
2,796,374	-	stpA	b2669	0.64	-0.9
2,796,375	-	stpA	b2669	0.65	-1.3
2,796,375	-	stpA	b2669	0.65	-1.3
2,796,376	+	stpA	b2669	0.65	+0.1
2,796,385	-	stpA	b2669	0.67	+1.9
2,796,394	-	stpA	b2669	0.69	+0.4
2,796,406	-	stpA	b2669	0.72	-0.3
2,796,407	+	stpA	b2669	0.73	+1.1
2,796,407	+	stpA	b2669	0.73	+1.1
2,796,442	-	stpA	b2669	0.81	+0.2
2,796,443	+	stpA	b2669	0.81	+2.1
2,796,452	-	stpA	b2669	0.84	+1.6
2,796,452	-	stpA	b2669	0.84	+0.3
2,796,474	-	stpA	b2669	0.89	-0.3
2,796,488	-				+1.1
2,796,488	-				+1.1
2,796,576	-				+1.1
2,796,619	-				-1.8
2,796,709	-				-2.3
2,796,709	-				-1.4
2,796,718	-				-0.4
2,796,718	-				-0.9
2,796,718	-				-2.1
2,796,728	-				-0.4
2,796,733	-				-1.6
2,796,742	-				-0.3
2,796,742	-				-0.4
2,796,742	-				-0.4
2,796,882	-				+0.5
2,796,891	+				-0.9
2,797,102	-				-1.1
2,797,199	+				+1.9
2,797,199	+				+2.4
2,797,240	+	ygaW	b2670	0.12	+0.8
2,797,303	-	ygaW	b2670	0.26	+0.7
2,797,303	-	ygaW	b2670	0.26	+2.4
2,797,323	+	ygaW	b2670	0.30	+1.3
2,797,323	+	ygaW	b2670	0.30	+0.4
2,797,362	+	ygaW	b2670	0.39	+0.2
2,797,362	+	ygaW	b2670	0.39	-1.8
2,797,364	+	ygaW	b2670	0.40	+1.1
2,797,364	+	ygaW	b2670	0.40	+2.6
2,797,364	-	ygaW	b2670	0.40	+0.1
2,797,369	-	ygaW	b2670	0.41	-0.1
2,797,369	-	ygaW	b2670	0.41	-0.8
2,797,482	+	ygaW	b2670	0.66	-0.4
2,797,482	+	ygaW	b2670	0.66	+0.5
2,797,484	+	ygaW	b2670	0.66	+0.6
2,797,492	-	ygaW	b2670	0.68	-1.5
2,797,512	+	ygaW	b2670	0.72	-0.2
2,797,512	+	ygaW	b2670	0.72	+0.2