Strain Fitness in Agrobacterium fabrum C58 around Atu5173

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
169,165	+				-1.1
169,319	+		Atu5172	0.22	-1.9
169,421	-		Atu5172	0.32	-0.6
169,448	-		Atu5172	0.34	+0.2
169,454	-		Atu5172	0.35	+0.5
169,512	-		Atu5172	0.41	-0.0
169,512	-		Atu5172	0.41	+0.2
169,519	+		Atu5172	0.41	-0.8
169,519	+		Atu5172	0.41	+0.2
169,523	+		Atu5172	0.42	-0.4
169,527	-		Atu5172	0.42	+0.3
169,698	+		Atu5172	0.59	+0.1
169,821	+		Atu5172	0.71	+0.1
169,903	-		Atu5172	0.79	+2.7
169,932	+		Atu5172	0.82	-0.1
170,076	-				-0.8
170,082	-				-0.4
170,141	-				+0.5
170,191	+				+1.1
170,243	+		Atu5173	0.21	+2.7
170,265	-		Atu5173	0.26	-0.4
170,301	+		Atu5173	0.36	+2.7
170,365	-		Atu5173	0.52	-1.5
170,563	+				+0.5
170,599	+				-0.8
170,599	+				+0.8
170,715	+				+0.0
170,857	+				+2.7
170,871	+				+0.8
170,878	-				-0.4
170,879	-				+0.6
170,879	-				+0.4
170,967	+				-0.3
171,053	+				+0.8
171,107	+		Atu8203	0.16	+1.0
171,176	+		Atu8203	0.40	+1.7
171,240	-		Atu8203	0.63	+1.0
171,240	-		Atu8203	0.63	+1.7
171,291	+		Atu8203	0.81	-0.6
171,321	+				-1.0
171,371	-				+0.8
171,376	-				-0.1
171,385	+				-0.4
171,417	-				+0.2