Strain Fitness in Agrobacterium fabrum C58 around Atu3020

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
11,773	+		Atu3019	0.13	-0.6
11,818	+		Atu3019	0.21	-0.1
11,887	+		Atu3019	0.34	+0.7
11,887	+		Atu3019	0.34	-1.1
11,890	+		Atu3019	0.35	-1.9
11,895	-		Atu3019	0.36	-0.6
11,934	+		Atu3019	0.43	-0.6
11,936	+		Atu3019	0.43	-1.6
11,942	-		Atu3019	0.45	-0.3
11,978	+		Atu3019	0.51	-0.1
11,986	-		Atu3019	0.53	-0.6
12,044	-		Atu3019	0.64	-0.4
12,112	-		Atu3019	0.76	-0.4
12,142	+		Atu3019	0.82	-0.9
12,223	-				-0.4
12,237	-				+0.3
12,294	+				-0.8
12,358	-				-0.2
12,380	-				-0.2
12,392	+				+0.1
12,397	+				-1.1
12,476	+				-0.1
12,483	+				-0.5
12,483	+				+0.3
12,491	-				-1.3
12,491	-				+0.1
12,491	-				-0.9
12,497	+				+0.4
12,785	+		Atu3020	0.16	-0.4
12,815	+		Atu3020	0.20	-0.6
12,970	+		Atu3020	0.42	-0.4
12,970	+		Atu3020	0.42	-0.5
12,970	+		Atu3020	0.42	-0.7
12,970	+		Atu3020	0.42	+0.1
12,970	+		Atu3020	0.42	-1.0
12,970	+		Atu3020	0.42	-0.7
12,984	+		Atu3020	0.44	-0.2
13,103	+		Atu3020	0.61	-0.3
13,303	+		Atu3020	0.89	-0.6
13,303	+		Atu3020	0.89	-0.7
13,383	-				+0.6
13,400	-				-0.5
13,421	+				-0.3
13,473	+				-1.0
13,545	-		Atu3021	0.12	-0.7
13,547	-		Atu3021	0.12	+0.2
13,659	+		Atu3021	0.22	-0.4
13,665	-		Atu3021	0.23	-0.6
13,667	+		Atu3021	0.23	-1.0
13,671	+		Atu3021	0.23	-0.4
13,722	-		Atu3021	0.28	-1.1
13,838	+		Atu3021	0.38	+0.8
13,846	-		Atu3021	0.39	-1.4
13,920	+		Atu3021	0.46	-0.2
13,990	-		Atu3021	0.52	-0.4
14,051	-		Atu3021	0.57	-0.1
14,061	-		Atu3021	0.58	-0.9
14,158	+		Atu3021	0.67	-0.4
14,198	-		Atu3021	0.70	-0.8
14,198	-		Atu3021	0.70	-0.7
14,200	+		Atu3021	0.71	-1.9
14,221	-		Atu3021	0.72	-0.6
14,221	-		Atu3021	0.72	-1.0