Strain Fitness in Agrobacterium fabrum C58 around Atu3001

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
395	+				-0.7
638	+				-1.6
646	+				-1.6
1,050	+		Atu3001	0.15	-0.8
1,058	-		Atu3001	0.16	-0.6
1,109	-		Atu3001	0.23	-0.6
1,352	+		Atu3001	0.57	-1.1
1,436	+		Atu3001	0.69	+0.1
1,436	+		Atu3001	0.69	-0.4
1,738	+				-2.5
1,746	-				-1.0
1,746	-				-1.7
1,861	-				-0.3
1,935	-				+0.4
1,957	-				+0.4
2,273	-				-0.3
2,368	-				-1.2
2,550	+				-0.3
2,577	+				-1.4