Strain Fitness in Agrobacterium fabrum C58 around Atu2810

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
2,812,493	-		Atu2809	0.11	+0.2
2,812,587	+		Atu2809	0.21	+0.9
2,812,710	+		Atu2809	0.34	-0.4
2,812,710	+		Atu2809	0.34	+0.4
2,812,711	-		Atu2809	0.34	+0.9
2,812,718	-		Atu2809	0.35	+0.4
2,812,718	-		Atu2809	0.35	+0.7
2,812,718	-		Atu2809	0.35	+0.7
2,812,767	+		Atu2809	0.40	+0.8
2,812,832	+		Atu2809	0.46	+0.7
2,812,935	+		Atu2809	0.57	+0.3
2,812,943	-		Atu2809	0.58	+1.2
2,813,013	-		Atu2809	0.65	+2.3
2,813,037	+		Atu2809	0.68	-1.0
2,813,107	+		Atu2809	0.75	+0.9
2,813,142	+		Atu2809	0.78	+0.5
2,813,358	-				+0.2
2,813,433	+				+0.1
2,813,433	+				+0.9
2,813,433	+				+0.6
2,813,463	+		Atu2810	0.11	+0.4
2,813,476	+		Atu2810	0.12	-0.3
2,813,600	-		Atu2810	0.24	+1.4
2,813,620	-		Atu2810	0.26	+0.8
2,813,660	+		Atu2810	0.30	+0.2
2,813,660	+		Atu2810	0.30	+0.8
2,813,660	+		Atu2810	0.30	+0.9
2,813,660	+		Atu2810	0.30	-0.1
2,813,660	+		Atu2810	0.30	+0.5
2,813,765	+		Atu2810	0.40	+2.3
2,813,773	-		Atu2810	0.41	+1.1
2,813,773	-		Atu2810	0.41	+0.8
2,813,773	-		Atu2810	0.41	+0.3
2,813,773	-		Atu2810	0.41	+0.4
2,813,788	-		Atu2810	0.42	+0.7
2,813,882	+		Atu2810	0.51	+0.9
2,813,888	+		Atu2810	0.52	+0.5
2,813,932	-		Atu2810	0.56	+0.6
2,813,942	+		Atu2810	0.57	+2.2
2,814,074	+		Atu2810	0.69	-0.0
2,814,074	+		Atu2810	0.69	+1.3
2,814,082	-		Atu2810	0.70	+0.6
2,814,116	-		Atu2810	0.73	+0.4
2,814,228	-		Atu2810	0.84	+0.5
2,814,237	+		Atu2810	0.85	+0.6
2,814,243	-		Atu2810	0.85	+1.4
2,814,263	-		Atu2810	0.87	+3.3
2,814,307	-				+0.7
2,814,387	-				+0.4
2,814,389	+				-0.2
2,814,543	+		Atu2811	0.14	+0.2
2,814,668	-		Atu2811	0.24	-0.2
2,814,724	-		Atu2811	0.29	-0.1
2,814,778	+		Atu2811	0.33	-0.7
2,814,892	-		Atu2811	0.43	-0.0
2,815,003	-		Atu2811	0.52	-0.4
2,815,099	+		Atu2811	0.60	-0.3
2,815,107	-		Atu2811	0.61	+0.3
2,815,153	-		Atu2811	0.65	-1.6
2,815,248	-		Atu2811	0.72	+0.3
2,815,301	+		Atu2811	0.77	-0.0
2,815,301	+		Atu2811	0.77	-0.7
2,815,309	-		Atu2811	0.78	+0.7
2,815,341	+		Atu2811	0.80	-0.2