Strain Fitness in Agrobacterium fabrum C58 around Atu1731

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,715,550	+		Atu1730	0.43	-0.1
1,715,558	+		Atu1730	0.44	-0.7
1,715,566	-		Atu1730	0.45	-0.4
1,715,568	-		Atu1730	0.45	-0.5
1,715,568	-		Atu1730	0.45	-0.9
1,715,568	-		Atu1730	0.45	-0.3
1,715,865	-		Atu1730	0.80	-0.3
1,715,937	-		Atu1730	0.88	+0.5
1,715,963	+				+0.5
1,715,993	-				-0.6
1,716,367	-		Atu1731	0.41	-0.9
1,716,367	-		Atu1731	0.41	+0.1
1,716,369	+		Atu1731	0.42	-0.0
1,716,408	+		Atu1731	0.50	-1.3
1,716,408	+		Atu1731	0.50	-0.8
1,716,535	+		Atu1731	0.75	-0.5
1,716,543	-		Atu1731	0.77	-0.2
1,716,543	-		Atu1731	0.77	-0.0
1,716,543	-		Atu1731	0.77	-0.6
1,716,621	+				-0.0
1,716,669	+				-2.4
1,716,818	+				-0.1