Strain Fitness in Agrobacterium fabrum C58 around Atu1666

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,652,547	-				+0.2
1,652,547	-				-0.4
1,652,592	+				-0.4
1,652,681	-				+1.7
1,652,703	+				-0.4
1,652,722	+				-1.0
1,652,799	-				-0.2
1,652,819	+		Atu1666	0.11	-0.8
1,652,827	-		Atu1666	0.13	-0.5
1,652,845	-		Atu1666	0.18	-0.7
1,652,883	-		Atu1666	0.29	-0.4
1,652,885	+		Atu1666	0.29	-0.1
1,652,927	-		Atu1666	0.41	-0.2
1,652,995	-		Atu1666	0.60	-0.3
1,653,076	+				-0.1
1,653,076	+				+0.1
1,653,086	+				+0.1
1,653,086	+				+1.2
1,653,102	+				-0.8
1,653,120	-				+0.2
1,653,125	-				+0.1
1,653,130	+				+0.2
1,653,135	+				+0.7
1,653,270	-		Atu1667	0.84	+0.0
1,653,399	+				-0.7
1,653,459	+				+1.1
1,653,459	+				+0.0
1,653,467	-				-2.4
1,653,467	-				+0.2
1,653,467	-				-0.0
1,653,467	-				+0.1
1,653,531	+				+0.1
1,653,648	+				+0.6
1,653,656	+				-0.3
1,653,668	+				+0.1
1,653,755	+				+0.4
1,653,781	+		Atu8161	0.16	-0.5
1,653,852	+		Atu8161	0.65	+0.7
1,653,895	+				+0.6
1,653,993	-				-0.7
1,654,021	+				+1.7