Strain Fitness in Agrobacterium fabrum C58 around Atu5034

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
34,313	-		Atu5033	0.70	+0.4
34,342	-		Atu5033	0.73	+3.1
34,366	-		Atu5033	0.75	-0.1
34,370	+		Atu5033	0.75	+0.8
34,375	+		Atu5033	0.76	+2.4
34,378	-		Atu5033	0.76	+0.8
34,414	-		Atu5033	0.79	+3.1
34,425	-		Atu5033	0.80	+0.6
34,466	-		Atu5033	0.84	+0.3
34,471	-		Atu5033	0.85	+0.2
34,512	-		Atu5033	0.88	-0.1
34,519	-		Atu5033	0.89	+0.2
34,554	-				-0.1
34,556	+				+0.2
34,576	+				+0.9
34,584	-				+2.2
34,604	-				+0.4
34,625	+				+0.4
34,633	-				+0.8
34,633	-				+0.2
34,744	+				+0.9
34,744	+				+1.4
34,749	+				-0.4
34,749	+				-0.1
34,752	-				+0.7
34,752	-				+0.5
34,752	-				+0.6
34,862	+				-1.8
35,023	+				-1.3
35,052	-				-0.1
35,068	+				-0.2
35,068	+				+0.2
35,077	-				+0.1
35,082	-				+0.6
35,088	-				+0.4
35,134	+				-0.8
35,134	+				+0.4
35,142	-				-0.1
35,142	-				+0.5
35,142	-				+0.8
35,173	+				+0.8
35,173	+				-0.8
35,173	+				-0.8
35,173	+				+0.9
35,173	+				+1.8
35,173	+				+2.1
35,173	+				+1.0
35,173	+				-0.3
35,178	+				+0.9
35,178	+				+0.0
35,178	+				+0.8
35,178	+				+2.2
35,178	+				-1.2
35,181	-				+0.9
35,181	-				+1.3
35,181	-				-0.8
35,186	-				+0.1
35,186	-				+0.6
35,191	-				+0.0
35,208	+				+2.1
35,216	-				+0.2
35,231	-				+0.4
35,269	+		Atu5034	0.17	-0.1
35,375	-		Atu5034	0.64	-0.7
35,415	-		Atu5034	0.81	-1.1
35,494	+				+0.5
35,517	+				+0.3
35,541	+				+0.9
35,563	+				-0.7
35,571	-				+1.1
35,683	+		Atu5035	0.17	+1.3
35,691	-		Atu5035	0.18	+0.8
35,741	-		Atu5035	0.23	-0.1
35,786	-		Atu5035	0.28	-0.0
35,910	+		Atu5035	0.42	+2.1
35,914	-		Atu5035	0.43	-1.5
35,918	+		Atu5035	0.43	+1.4
36,025	-		Atu5035	0.55	-0.0
36,067	-		Atu5035	0.60	-1.2
36,072	-		Atu5035	0.60	+0.9
36,168	+		Atu5035	0.71	+1.0
36,283	-		Atu5035	0.84	+1.5
36,381	-				+0.5
36,402	+				+0.3
36,411	-				+1.0
36,424	-				+2.1
36,444	-				+0.7
36,457	-				-0.5