Strain Fitness in Agrobacterium fabrum C58 around Atu8038

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,290,320	+		Atu4171	0.47	+0.0
1,290,373	-		Atu4171	0.49	+0.6
1,290,449	+		Atu4171	0.54	+0.4
1,290,522	+		Atu4171	0.57	-0.3
1,290,631	+		Atu4171	0.63	-0.3
1,290,638	-		Atu4171	0.64	+0.6
1,291,020	-		Atu4171	0.84	-0.4
1,291,033	+		Atu4171	0.85	-0.5
1,291,072	+		Atu4171	0.87	-1.2
1,291,340	-		Atu8038	0.13	-0.4
1,291,357	+		Atu8038	0.19	-1.0
1,291,357	+		Atu8038	0.19	+0.2
1,291,357	+		Atu8038	0.19	+0.6
1,291,365	-		Atu8038	0.22	+0.4
1,291,365	-		Atu8038	0.22	+0.1
1,291,441	+		Atu8038	0.52	+1.0
1,291,449	-		Atu8038	0.55	+0.1
1,291,454	-		Atu8038	0.57	-0.1
1,291,459	-		Atu8038	0.59	-0.2
1,291,488	+		Atu8038	0.71	-0.2
1,291,488	+		Atu8038	0.71	-0.1
1,291,493	-		Atu8038	0.73	+0.3
1,291,513	-		Atu8038	0.80	+0.5
1,291,515	+		Atu8038	0.81	-0.6
1,291,556	-				-0.7
1,291,630	+				-2.1
1,291,684	+				-0.6