Strain Fitness in Agrobacterium fabrum C58 around Atu6129

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
146,941	+		Atu6127	0.89	+1.7
146,941	+		Atu6127	0.89	-0.4
146,947	-		Atu6127	0.90	-1.1
147,050	-				+1.7
147,077	+				+1.1
147,077	+				-1.5
147,082	+				+0.2
147,141	+				+0.5
147,164	+				+0.4
147,212	-				+1.3
147,236	-				+1.3
147,288	+				-0.0
147,301	+				-0.7
147,301	+				+0.1
147,331	+				+0.9
147,339	-		Atu6128	0.10	+1.7
147,339	-		Atu6128	0.10	+0.3
147,469	+		Atu6128	0.34	+0.5
147,515	+		Atu6128	0.43	-0.3
147,525	+		Atu6128	0.45	+1.2
147,535	-		Atu6128	0.47	+0.3
147,535	-		Atu6128	0.47	+0.7
147,536	+		Atu6128	0.47	-0.2
147,627	+		Atu6128	0.64	+1.4
147,651	+		Atu6128	0.69	+1.3
147,673	+		Atu6128	0.73	-0.8
147,749	+		Atu6128	0.87	+0.8
147,757	-		Atu6128	0.89	+1.1
147,768	-				-1.0
147,768	-				+0.9
147,783	-				+1.3
147,796	+				+0.7
147,803	+				+1.6
147,804	-				+1.3
147,806	-				+1.6
147,806	-				+1.7
147,835	+				+0.7
147,902	+				+0.3
148,005	-				+1.3
148,023	-		Atu6129	0.11	-1.3
148,049	-		Atu6129	0.13	-0.9
148,101	-		Atu6129	0.18	+1.7
148,101	-		Atu6129	0.18	+1.3
148,141	+		Atu6129	0.21	+0.1
148,141	+		Atu6129	0.21	+0.9
148,149	-		Atu6129	0.22	-0.4
148,198	-		Atu6129	0.27	-1.0
148,223	+		Atu6129	0.29	+0.5
148,274	+		Atu6129	0.34	-0.2
148,372	+		Atu6129	0.43	+0.5
148,380	-		Atu6129	0.43	-0.2
148,403	+		Atu6129	0.45	+2.1
148,411	-		Atu6129	0.46	+0.9
148,420	+		Atu6129	0.47	+0.3
148,420	+		Atu6129	0.47	-1.4
148,428	-		Atu6129	0.48	+1.3
148,458	+		Atu6129	0.50	+1.1
148,470	+		Atu6129	0.51	-0.1
148,650	-		Atu6129	0.68	+3.3
148,655	+		Atu6129	0.68	+0.4
148,655	+		Atu6129	0.68	+0.3
148,663	-		Atu6129	0.69	-0.2
148,678	+		Atu6129	0.70	+0.5
148,752	-		Atu6129	0.77	-0.8
148,787	+		Atu6129	0.80	+0.9
148,819	-		Atu6129	0.83	+0.3
148,826	+		Atu6129	0.84	+1.7
148,842	+		Atu6129	0.85	+0.1
148,842	+		Atu6129	0.85	+0.7
148,988	+				-1.5
148,988	+				+0.3
149,006	-				-0.9
149,031	-				+0.8
149,033	+				-0.9
149,041	-				+1.7
149,081	+		Atu6130	0.10	-0.4
149,175	-		Atu6130	0.25	+0.8
149,183	+		Atu6130	0.27	+0.4
149,235	-		Atu6130	0.35	+0.3
149,237	+		Atu6130	0.35	-1.5
149,273	+		Atu6130	0.41	-0.6
149,278	+		Atu6130	0.42	+0.4
149,443	+		Atu6130	0.68	-0.2
149,453	+		Atu6130	0.69	-0.2
149,453	+		Atu6130	0.69	+0.1
149,525	+		Atu6130	0.81	+0.4
149,555	+		Atu6130	0.86	+2.0
149,563	-		Atu6130	0.87	-0.4
149,589	-				+0.1
149,634	+				+0.8
149,636	+				+0.4
149,642	-				+0.7
149,745	-				-1.7
149,781	+				+0.8
149,789	-				-0.3
149,789	-				-0.2
149,823	+				-0.8
149,831	-				+0.3
149,837	-				-0.3
149,931	+				+1.0
149,991	+				+1.0
149,991	+				-0.0