Strain Fitness in Agrobacterium fabrum C58 around Atu6092

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
109,056	+				+2.5
109,064	-				+0.6
109,079	-				+1.5
109,079	-				+1.7
109,081	-				-0.2
109,166	-				+3.3
109,183	+				-0.1
109,183	+				+0.9
109,244	-				-0.6
109,260	+				-0.2
109,260	+				+1.7
109,260	+				+0.7
109,270	-				-0.9
109,272	+				+0.4
109,373	+		Atu6091	0.12	+0.1
109,373	+		Atu6091	0.12	+4.3
109,399	+		Atu6091	0.16	+1.3
109,514	+		Atu6091	0.31	+0.1
109,520	-		Atu6091	0.32	+0.0
109,583	-		Atu6091	0.40	+0.5
109,583	-		Atu6091	0.40	+0.0
109,743	+		Atu6091	0.61	-0.5
109,769	-		Atu6091	0.65	+0.5
109,770	-		Atu6091	0.65	+0.7
109,772	+		Atu6091	0.65	+0.8
109,893	-		Atu6091	0.81	-0.8
109,893	-		Atu6091	0.81	+0.7
109,893	-		Atu6091	0.81	+0.1
109,893	-		Atu6091	0.81	+0.5
109,928	-		Atu6091	0.86	+0.9
109,957	+		Atu6091	0.90	+0.8
109,957	+		Atu6091	0.90	+0.3
110,046	-				+0.9
110,160	-				-0.8
110,211	+		Atu6092	0.11	+0.8
110,276	+		Atu6092	0.16	+0.3
110,300	+		Atu6092	0.18	-0.1
110,305	+		Atu6092	0.18	-1.0
110,389	+		Atu6092	0.24	+0.9
110,402	+		Atu6092	0.25	+0.2
110,402	+		Atu6092	0.25	+0.5
110,407	+		Atu6092	0.25	+1.0
110,410	-		Atu6092	0.26	+2.6
110,471	+		Atu6092	0.30	+0.4
110,471	+		Atu6092	0.30	+1.8
110,500	-		Atu6092	0.32	+0.1
110,540	-		Atu6092	0.35	-0.4
110,560	+		Atu6092	0.36	+1.3
110,587	-		Atu6092	0.38	+1.7
110,667	+		Atu6092	0.44	+0.6
110,717	+		Atu6092	0.47	+0.0
110,717	+		Atu6092	0.47	+0.3
110,779	-		Atu6092	0.52	+1.7
110,779	-		Atu6092	0.52	+1.4
110,784	+		Atu6092	0.52	+1.0
110,784	+		Atu6092	0.52	+0.2
110,799	+		Atu6092	0.53	+0.9
110,804	+		Atu6092	0.53	+3.7
110,821	+		Atu6092	0.54	-0.5
110,835	+		Atu6092	0.55	+0.2
110,901	-		Atu6092	0.60	+0.4
111,004	+		Atu6092	0.67	+0.6
111,068	+		Atu6092	0.72	-0.6
111,108	+		Atu6092	0.75	+2.3
111,157	+		Atu6092	0.78	+0.4
111,195	+		Atu6092	0.81	+0.7
111,200	+		Atu6092	0.81	-0.3
111,203	-		Atu6092	0.81	-1.5
111,203	-		Atu6092	0.81	-0.1
111,213	-		Atu6092	0.82	+0.4
111,320	-		Atu6092	0.90	+0.9
111,342	-				+1.0
111,368	+				-1.6
111,384	+				+0.8
111,385	+				+0.5
111,473	-				-0.2
111,503	-				+0.7
111,542	-				-1.8
111,557	+				-0.1
111,634	+				-0.1
111,634	+				+0.3
111,634	+				+1.5
111,642	-				+0.3
111,690	+				+1.8
111,693	-				+0.2
111,698	-				-0.2
111,701	-				-0.2
111,716	+				+0.4
111,780	+				-0.3
111,781	-				-0.4
111,785	-				+1.7
111,865	-		Atu6093	0.12	-0.7
111,912	-		Atu6093	0.14	+0.3
111,975	+		Atu6093	0.16	+0.3
111,975	+		Atu6093	0.16	-1.3
111,975	+		Atu6093	0.16	+0.3
111,975	+		Atu6093	0.16	+0.2
111,975	+		Atu6093	0.16	+0.5
111,975	+		Atu6093	0.16	-1.1
111,983	-		Atu6093	0.16	-0.1
112,257	+		Atu6093	0.24	-0.2
112,265	-		Atu6093	0.25	+1.7
112,265	-		Atu6093	0.25	-0.4
112,299	+		Atu6093	0.26	-0.7
112,324	-		Atu6093	0.26	+0.7
112,361	+		Atu6093	0.28	+0.8
112,371	+		Atu6093	0.28	+2.0
112,379	-		Atu6093	0.28	+1.5