Strain Fitness in Agrobacterium fabrum C58 around Atu6058

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
68,746	+				-1.1
68,758	+				+2.3
68,777	-				-0.5
68,880	+		Atu6057	0.14	-0.9
69,052	+		Atu6057	0.32	-0.2
69,101	+		Atu6057	0.37	+0.4
69,104	-		Atu6057	0.38	+3.3
69,117	+		Atu6057	0.39	+2.8
69,117	+		Atu6057	0.39	+0.7
69,125	-		Atu6057	0.40	+1.1
69,125	-		Atu6057	0.40	+0.5
69,131	-		Atu6057	0.41	+1.1
69,141	+		Atu6057	0.42	+1.1
69,148	+		Atu6057	0.42	-0.8
69,171	+		Atu6057	0.45	+0.9
69,184	-		Atu6057	0.46	+0.5
69,184	-		Atu6057	0.46	+0.9
69,271	+		Atu6057	0.56	+1.7
69,337	+		Atu6057	0.63	-0.4
69,356	-		Atu6057	0.65	+1.0
69,474	-		Atu6057	0.77	+2.3
69,476	+		Atu6057	0.77	+1.5
69,482	+		Atu6057	0.78	+0.3
69,483	+		Atu6057	0.78	-0.5
69,493	+		Atu6057	0.79	+1.0
69,493	+		Atu6057	0.79	+0.5
69,503	-		Atu6057	0.80	+0.2
69,534	+		Atu6057	0.83	+1.2
69,600	+				-0.3
69,628	+				+1.1
69,630	+				+2.3
69,638	-				+1.3
69,717	+				+0.2
69,741	+				+0.7
69,754	+				+0.7
69,762	-				+0.5
69,792	+		Atu6058	0.13	-0.1
69,800	-		Atu6058	0.14	-0.0
69,806	+		Atu6058	0.15	+0.8
69,806	+		Atu6058	0.15	-0.7
69,806	+		Atu6058	0.15	+1.3
69,807	+		Atu6058	0.15	+1.1
69,811	+		Atu6058	0.16	+0.9
69,814	-		Atu6058	0.16	+0.7
69,814	-		Atu6058	0.16	+2.5
69,863	-		Atu6058	0.22	+0.3
69,922	-		Atu6058	0.29	+2.5
69,934	+		Atu6058	0.31	+1.5
69,965	+		Atu6058	0.35	+2.5
69,968	-		Atu6058	0.35	+1.1
69,974	-		Atu6058	0.36	+0.3
70,024	+		Atu6058	0.42	+1.3
70,024	+		Atu6058	0.42	+0.8
70,032	-		Atu6058	0.43	-0.4
70,033	+		Atu6058	0.43	-1.6
70,090	+		Atu6058	0.50	-1.1
70,121	-		Atu6058	0.54	+1.0
70,121	-		Atu6058	0.54	+0.4
70,131	-		Atu6058	0.55	+1.3
70,131	-		Atu6058	0.55	+0.8
70,149	-		Atu6058	0.58	+0.2
70,157	-		Atu6058	0.59	-0.3
70,204	-		Atu6058	0.64	+0.0
70,395	+		Atu6058	0.88	+0.9
70,400	+		Atu6058	0.89	+3.6
70,403	-		Atu6058	0.89	+0.3
70,408	-		Atu6058	0.90	+0.6
70,557	-				-0.0
70,569	+				-0.0
70,569	+				+1.7
70,569	+				+0.9
70,569	+				-0.9
70,577	-				+2.3
70,677	-		Atu6059	0.17	+1.8
70,775	+		Atu6059	0.27	+1.7
70,775	-		Atu6059	0.27	+1.6
70,776	-		Atu6059	0.27	+0.1
70,783	-		Atu6059	0.28	+1.7
70,785	+		Atu6059	0.28	+1.4
70,809	-		Atu6059	0.30	-0.9
70,809	-		Atu6059	0.30	-0.7
70,857	+		Atu6059	0.35	-0.2
70,865	-		Atu6059	0.36	-0.1
70,865	-		Atu6059	0.36	+0.7
70,882	+		Atu6059	0.38	+1.7
70,887	+		Atu6059	0.39	+0.5
70,928	-		Atu6059	0.43	+1.3
70,936	+		Atu6059	0.44	+0.1
70,936	+		Atu6059	0.44	+0.5
70,936	+		Atu6059	0.44	-0.0
70,939	-		Atu6059	0.44	+0.7
70,973	-		Atu6059	0.47	+0.3
71,042	+		Atu6059	0.55	+0.6
71,050	-		Atu6059	0.55	+0.9
71,052	+		Atu6059	0.56	+2.7
71,052	+		Atu6059	0.56	+0.3
71,082	-		Atu6059	0.59	-1.2
71,111	+		Atu6059	0.62	+1.4
71,123	+		Atu6059	0.63	-0.4
71,129	-		Atu6059	0.64	-0.5
71,154	+		Atu6059	0.66	+2.8
71,154	+		Atu6059	0.66	-0.6
71,162	-		Atu6059	0.67	+4.3
71,184	-		Atu6059	0.69	+0.8
71,184	-		Atu6059	0.69	-0.2
71,184	-		Atu6059	0.69	+1.7
71,273	+		Atu6059	0.79	+0.7
71,286	-		Atu6059	0.80	+2.7
71,286	-		Atu6059	0.80	-0.2
71,286	-		Atu6059	0.80	+3.3
71,286	-		Atu6059	0.80	+1.8
71,309	+		Atu6059	0.82	+0.6
71,331	-		Atu6059	0.85	+0.6
71,378	-		Atu6059	0.90	+2.3
71,432	+				+0.2
71,440	-				+0.9
71,455	+				-0.2