Strain Fitness in Agrobacterium fabrum C58 around Atu5091

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
94,269	-		Atu5090	0.50	+0.2
94,289	+		Atu5090	0.51	-0.0
94,315	-		Atu5090	0.53	+0.4
94,315	-		Atu5090	0.53	+0.3
94,352	+		Atu5090	0.54	+0.8
94,359	+		Atu5090	0.55	+0.4
94,367	-		Atu5090	0.55	-0.4
94,376	+		Atu5090	0.56	+0.8
94,384	-		Atu5090	0.56	-1.6
94,384	-		Atu5090	0.56	-0.3
94,438	-		Atu5090	0.59	+0.0
94,491	+		Atu5090	0.61	+0.7
94,493	-		Atu5090	0.62	-0.7
94,506	+		Atu5090	0.62	+1.4
94,511	+		Atu5090	0.62	+0.6
94,528	+		Atu5090	0.63	-0.3
94,548	+		Atu5090	0.64	-1.4
94,548	+		Atu5090	0.64	+0.2
94,590	-		Atu5090	0.66	-1.7
94,631	+		Atu5090	0.69	+0.9
94,646	-		Atu5090	0.69	-1.9
94,646	-		Atu5090	0.69	-2.0
94,646	-		Atu5090	0.69	+0.6
94,689	-		Atu5090	0.71	-0.1
94,720	-		Atu5090	0.73	+2.1
94,732	+		Atu5090	0.74	+2.3
94,750	-		Atu5090	0.75	+0.1
94,847	+		Atu5090	0.79	+0.5
94,847	+		Atu5090	0.79	-0.0
94,857	+		Atu5090	0.80	+1.8
94,904	+		Atu5090	0.82	+0.1
94,967	-		Atu5090	0.86	+0.1
94,972	-		Atu5090	0.86	+0.4
95,033	+		Atu5090	0.89	-0.6
95,042	+		Atu5090	0.89	+0.8
95,068	+				-0.2
95,069	+				+0.8
95,109	-				+0.7
95,154	-				+0.6
95,193	+				+1.8
95,345	+				+0.4
95,502	-		Atu5091	0.21	-0.6
95,568	-		Atu5091	0.26	+0.3
95,588	+		Atu5091	0.28	+2.1
95,593	+		Atu5091	0.28	-0.8
95,593	+		Atu5091	0.28	+0.3
95,601	-		Atu5091	0.29	-0.3
95,603	+		Atu5091	0.29	-1.1
95,611	-		Atu5091	0.30	+0.0
95,611	-		Atu5091	0.30	-0.0
95,649	+		Atu5091	0.33	-0.7
95,811	-		Atu5091	0.47	-1.0
95,811	-		Atu5091	0.47	+0.8
95,811	-		Atu5091	0.47	+1.5
95,886	+		Atu5091	0.53	-0.3
95,951	+		Atu5091	0.58	+1.5
95,959	-		Atu5091	0.59	+2.1
95,991	-		Atu5091	0.62	-0.6
96,013	-		Atu5091	0.63	+0.3
96,036	-		Atu5091	0.65	-0.2
96,098	+		Atu5091	0.71	-0.0
96,104	-		Atu5091	0.71	+0.7
96,127	-		Atu5091	0.73	-0.3
96,241	+		Atu5091	0.83	-1.8
96,246	-		Atu5091	0.83	+1.2
96,319	-		Atu5091	0.89	-1.5
96,369	+				-0.5
96,377	-				+1.0
96,385	-				+1.3
96,494	+				-0.5
96,494	+				-0.0
96,512	-				+0.3
96,533	-				+0.6
96,587	+				+0.3
96,657	-				-0.2
96,659	+				+0.6
96,666	+				-0.0
96,674	-				-0.5
96,676	+				-1.1
96,684	-				-1.2
96,684	-				-0.0
96,690	+				+2.8
96,709	-				+0.2
96,842	+				+1.3
96,842	+				-0.7
96,842	+				+1.0
96,854	+				-0.0
97,036	+				+1.0
97,062	+				+0.4
97,089	+				-0.2
97,089	+				+1.8
97,089	+				-0.1
97,089	+				-0.0
97,092	-				+1.1
97,097	-				+0.6
97,097	-				+0.6
97,142	+				+0.5
97,151	+				+0.4
97,157	-				+0.8
97,203	+				+0.5
97,203	+				+0.5
97,277	+				+0.0
97,280	-				-0.8
97,280	-				+0.7
97,283	+				+0.3
97,303	+				-0.0
97,306	-				-0.4
97,313	+				+0.0
97,372	-				+1.5
97,379	+				-0.6
97,428	-				+1.2