Strain Fitness in Agrobacterium fabrum C58 around Atu1076

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,067,686	-		Atu1075	0.47	+0.6
1,067,725	-		Atu1075	0.50	-0.3
1,067,754	+		Atu1075	0.52	-0.6
1,067,992	-		Atu1075	0.67	-0.4
1,068,071	+		Atu1075	0.73	-0.6
1,068,096	+		Atu1075	0.74	+0.4
1,068,180	-		Atu1075	0.80	+0.2
1,068,200	+		Atu1075	0.81	-0.1
1,068,218	+		Atu1075	0.82	-1.5
1,068,362	-				-0.1
1,068,557	-				+0.2
1,068,560	-				+1.2
1,068,725	-		Atu1076	0.18	+1.1
1,068,756	-		Atu1076	0.23	-0.5
1,068,780	+		Atu1076	0.27	-0.8
1,068,787	+		Atu1076	0.28	-0.8
1,068,789	-		Atu1076	0.29	+0.7
1,068,795	-		Atu1076	0.30	-0.8
1,068,795	-		Atu1076	0.30	-1.4
1,068,805	-		Atu1076	0.31	-0.2
1,069,472	+		Atu1077	0.12	+0.3
1,069,497	-		Atu1077	0.14	+0.9
1,069,579	-		Atu1077	0.20	-0.3
1,069,579	-		Atu1077	0.20	+0.7
1,069,579	-		Atu1077	0.20	-0.4
1,069,694	+		Atu1077	0.28	+1.3
1,069,871	+		Atu1077	0.41	+0.1
1,070,022	-		Atu1077	0.51	-0.5