Strain Fitness in Agrobacterium fabrum C58 around Atu0188

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
190,571	-		Atu0187	0.57	-0.5
190,600	-		Atu0187	0.58	-0.1
190,743	+		Atu0187	0.66	-0.3
190,743	+		Atu0187	0.66	+0.4
190,878	+		Atu0187	0.73	+2.8
190,918	+		Atu0187	0.75	+0.3
190,977	+		Atu0187	0.79	-0.2
190,992	-		Atu0187	0.79	+0.6
191,001	-		Atu0187	0.80	+0.0
191,044	-		Atu0187	0.82	-0.3
191,237	+				-0.9
191,237	+				-0.1
191,245	-				+0.5
191,245	-				+0.1
191,301	-				+0.8
191,361	+				-0.7
191,505	-				-0.9
191,544	-				-1.4
191,669	+		Atu0188	0.14	-1.2
191,760	-		Atu0188	0.22	+0.8
191,937	-		Atu0188	0.39	-1.5
192,427	-		Atu0188	0.83	-1.6
192,507	+				-1.6
192,633	+				-0.5
192,649	+				-0.2
192,685	-				-1.2
192,716	+				-0.8
192,959	-		Atu0189	0.31	-0.9