Strain Fitness in Agrobacterium fabrum C58 around Atu0035

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
37,299	+				+0.6
37,312	-				+1.2
37,572	+				-0.5
37,885	+		Atu0035	0.18	+0.2
38,006	+		Atu0035	0.26	+0.9
38,014	-		Atu0035	0.26	+0.0
38,105	-		Atu0035	0.32	+0.1
38,105	-		Atu0035	0.32	-0.6
38,153	-		Atu0035	0.35	+0.1
38,321	-		Atu0035	0.45	-0.0
38,329	-		Atu0035	0.46	+0.3
38,406	+		Atu0035	0.51	-0.3
38,551	-		Atu0035	0.60	+0.6
38,564	-		Atu0035	0.61	-0.1
38,572	-		Atu0035	0.61	-0.1
38,637	-		Atu0035	0.65	+0.3
38,664	-		Atu0035	0.67	-1.0
38,944	-		Atu0035	0.84	-0.1
39,085	-				+0.2
39,133	+				+0.3
39,153	-				-1.0
39,302	+				-0.2
39,364	-				-0.8
39,569	+		Atu0036	0.56	-0.0
39,585	-		Atu0036	0.59	+0.2
39,642	+		Atu0036	0.72	-0.5