Strain Fitness in Pseudomonas putida KT2440 around PP_4015

Experiment: 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.
4,526,596	+		PP_4015	0.65	-0.3
4,526,596	+		PP_4015	0.65	+0.2
4,526,596	+		PP_4015	0.65	-0.4
4,526,596	+				-0.8
4,526,597	-		PP_4015	0.65	-1.5
4,526,597	-		PP_4015	0.65	-1.4
4,526,597	-		PP_4015	0.65	-0.1
4,526,597	-		PP_4015	0.65	-2.4
4,526,597	-		PP_4015	0.65	+0.0
4,526,910	+				+0.3
4,526,910	+				+1.1
4,526,910	+				-0.5
4,526,915	+				+3.0