Strain Fitness in Pseudomonas putida KT2440 around PP_1260

Experiment: 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.
1,439,338	+		PP_1259	0.79	+0.2
1,439,411	-		PP_1259	0.84	-0.0
1,439,434	+		PP_1259	0.85	+0.1
1,439,491	+		PP_1259	0.89	-0.4
1,439,491	+		PP_1259	0.89	-0.9
1,439,492	-		PP_1259	0.89	-0.3
1,439,512	-				+0.7
1,439,643	+				-0.1
1,439,643	+				-0.3
1,439,643	+				+4.0
1,439,698	-				-0.1
1,439,772	+				+2.1
1,439,772	+				-0.1
1,439,995	-				-0.0
1,442,039	+				+0.4