Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt narX and narK are separated by 338 nucleotides narK and narG are separated by 515 nucleotides
b1222: narX - sensory histidine kinase in two-component regulatory system with NarL (NCBI), at 1,275,045 to 1,276,841
narX
b1223: narK - nitrate/nitrite transporter (NCBI), at 1,277,180 to 1,278,571
narK
b1224: narG - nitrate reductase 1, alpha subunit (NCBI), at 1,279,087 to 1,282,830
narG
Position (kb)
1277
1278
1279 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1276.194 kb on - strand, within narX at 1276.194 kb on - strand, within narX at 1276.540 kb on + strand, within narX at 1276.550 kb on - strand, within narX at 1276.664 kb on + strand at 1276.664 kb on + strand at 1276.711 kb on - strand at 1276.756 kb on - strand at 1276.825 kb on - strand at 1276.915 kb on + strand at 1277.137 kb on - strand at 1277.162 kb on - strand at 1277.162 kb on - strand at 1277.166 kb on + strand at 1277.184 kb on - strand at 1277.196 kb on - strand at 1277.688 kb on + strand, within narK at 1277.765 kb on + strand, within narK at 1277.799 kb on + strand, within narK at 1277.942 kb on + strand, within narK at 1277.942 kb on + strand, within narK at 1278.017 kb on - strand, within narK at 1278.184 kb on + strand, within narK at 1278.305 kb on - strand, within narK at 1278.309 kb on + strand, within narK at 1278.535 kb on + strand at 1278.535 kb on + strand at 1278.545 kb on + strand at 1278.545 kb on + strand at 1278.545 kb on + strand at 1278.545 kb on + strand at 1278.593 kb on + strand at 1278.646 kb on + strand at 1278.648 kb on + strand at 1278.648 kb on + strand at 1278.674 kb on + strand at 1278.674 kb on + strand at 1278.686 kb on + strand at 1278.686 kb on + strand at 1278.817 kb on - strand at 1278.845 kb on - strand at 1278.947 kb on - strand at 1279.014 kb on + strand at 1279.014 kb on + strand at 1279.022 kb on - strand at 1279.032 kb on + strand at 1279.032 kb on + strand at 1279.059 kb on + strand at 1279.169 kb on - strand at 1279.194 kb on + strand at 1279.373 kb on + strand at 1279.502 kb on - strand, within narG
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM remove 1,276,194 - narX b1222 0.64 +1.2 1,276,194 - narX b1222 0.64 +0.9 1,276,540 + narX b1222 0.83 +0.8 1,276,550 - narX b1222 0.84 -0.3 1,276,664 + -0.3 1,276,664 + +0.1 1,276,711 - -0.2 1,276,756 - -1.7 1,276,825 - +1.2 1,276,915 + +1.3 1,277,137 - +1.5 1,277,162 - -0.9 1,277,162 - -0.5 1,277,166 + -1.0 1,277,184 - -0.9 1,277,196 - -2.5 1,277,688 + narK b1223 0.36 +0.1 1,277,765 + narK b1223 0.42 -1.7 1,277,799 + narK b1223 0.44 +0.2 1,277,942 + narK b1223 0.55 -1.3 1,277,942 + narK b1223 0.55 -1.3 1,278,017 - narK b1223 0.60 -0.1 1,278,184 + narK b1223 0.72 -2.5 1,278,305 - narK b1223 0.81 -0.5 1,278,309 + narK b1223 0.81 -0.6 1,278,535 + +0.2 1,278,535 + +0.7 1,278,545 + +0.9 1,278,545 + -0.3 1,278,545 + +0.3 1,278,545 + -0.3 1,278,593 + -0.9 1,278,646 + +1.3 1,278,648 + +0.7 1,278,648 + -0.9 1,278,674 + +1.0 1,278,674 + +0.9 1,278,686 + -0.8 1,278,686 + +1.4 1,278,817 - +0.6 1,278,845 - +1.0 1,278,947 - -0.9 1,279,014 + -0.9 1,279,014 + -0.7 1,279,022 - +0.4 1,279,032 + -1.3 1,279,032 + -2.9 1,279,059 + +0.7 1,279,169 - +0.3 1,279,194 + -1.2 1,279,373 + -1.3 1,279,502 - narG b1224 0.11 +0.4
Or see this region's nucleotide sequence