Strain Fitness in Escherichia coli BW25113 around b0444

Experiment: LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntybaV and ybaW are separated by 93 nucleotidesybaW and ybaX are separated by 51 nucleotidesybaX and ybaE are separated by 64 nucleotides b0442: ybaV - hypothetical protein (NCBI), at 463,161 to 463,532 ybaV b0443: ybaW - hypothetical protein (NCBI), at 463,626 to 464,024 ybaW b0444: ybaX - predicted aluminum resistance protein (NCBI), at 464,076 to 464,771 ybaX b0445: ybaE - predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI), at 464,836 to 466,536 ybaE Position (kb) 464 465Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 463.173 kb on + strandat 463.173 kb on + strandat 463.182 kb on - strandat 463.184 kb on + strandat 463.184 kb on + strandat 463.184 kb on + strandat 463.184 kb on + strandat 463.186 kb on + strandat 463.192 kb on + strandat 463.192 kb on - strandat 463.192 kb on - strandat 463.193 kb on - strandat 463.204 kb on - strand, within ybaVat 463.205 kb on - strand, within ybaVat 463.205 kb on - strand, within ybaVat 463.288 kb on - strand, within ybaVat 463.303 kb on + strand, within ybaVat 463.438 kb on + strand, within ybaVat 463.465 kb on + strand, within ybaVat 463.473 kb on - strand, within ybaVat 463.483 kb on - strand, within ybaVat 463.518 kb on + strandat 463.590 kb on + strandat 463.608 kb on + strandat 463.655 kb on + strandat 463.655 kb on + strandat 463.761 kb on + strand, within ybaWat 463.761 kb on + strand, within ybaWat 463.775 kb on - strand, within ybaWat 463.775 kb on - strand, within ybaWat 463.826 kb on - strand, within ybaWat 463.879 kb on + strand, within ybaWat 463.879 kb on + strand, within ybaWat 463.897 kb on - strand, within ybaWat 463.911 kb on + strand, within ybaWat 463.920 kb on - strand, within ybaWat 463.920 kb on - strand, within ybaWat 463.977 kb on + strand, within ybaWat 463.977 kb on + strand, within ybaWat 463.977 kb on + strand, within ybaWat 463.977 kb on + strand, within ybaWat 463.979 kb on - strand, within ybaWat 463.986 kb on + strandat 463.986 kb on + strandat 464.035 kb on + strandat 464.035 kb on + strandat 464.209 kb on - strand, within ybaXat 464.209 kb on - strand, within ybaXat 464.226 kb on - strand, within ybaXat 464.230 kb on + strand, within ybaXat 464.287 kb on - strand, within ybaXat 464.332 kb on - strand, within ybaXat 464.332 kb on - strand, within ybaXat 464.344 kb on - strand, within ybaXat 464.346 kb on - strand, within ybaXat 464.346 kb on - strand, within ybaXat 464.433 kb on - strand, within ybaXat 464.433 kb on - strand, within ybaXat 464.511 kb on - strand, within ybaXat 464.511 kb on - strand, within ybaXat 464.523 kb on + strand, within ybaXat 464.523 kb on + strand, within ybaXat 464.551 kb on + strand, within ybaXat 464.553 kb on - strand, within ybaXat 464.553 kb on - strand, within ybaXat 464.557 kb on - strand, within ybaXat 464.557 kb on - strand, within ybaXat 464.559 kb on - strand, within ybaXat 464.569 kb on + strand, within ybaXat 464.579 kb on + strand, within ybaXat 464.582 kb on - strand, within ybaXat 464.589 kb on - strand, within ybaXat 464.594 kb on - strand, within ybaXat 464.675 kb on - strand, within ybaXat 464.708 kb on - strandat 464.772 kb on + strandat 464.772 kb on + strandat 464.803 kb on + strandat 464.926 kb on + strandat 464.969 kb on + strandat 464.969 kb on + strandat 464.977 kb on - strandat 464.977 kb on - strandat 465.058 kb on + strand, within ybaEat 465.143 kb on - strand, within ybaEat 465.180 kb on + strand, within ybaEat 465.181 kb on + strand, within ybaEat 465.181 kb on + strand, within ybaEat 465.194 kb on - strand, within ybaEat 465.194 kb on - strand, within ybaEat 465.196 kb on - strand, within ybaEat 465.246 kb on - strand, within ybaEat 465.290 kb on + strand, within ybaEat 465.293 kb on - strand, within ybaEat 465.307 kb on - strand, within ybaEat 465.449 kb on - strand, within ybaEat 465.530 kb on + strand, within ybaEat 465.538 kb on - strand, within ybaEat 465.539 kb on + strand, within ybaEat 465.550 kb on + strand, within ybaEat 465.556 kb on - strand, within ybaEat 465.594 kb on + strand, within ybaEat 465.594 kb on + strand, within ybaEat 465.594 kb on + strand, within ybaEat 465.643 kb on - strand, within ybaEat 465.667 kb on + strand, within ybaE

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
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463,173 + -0.3
463,173 + -0.1
463,182 - -1.9
463,184 + -0.4
463,184 + -2.1
463,184 + -1.9
463,184 + -0.7
463,186 + -0.0
463,192 + -0.2
463,192 - +0.8
463,192 - +1.2
463,193 - -1.7
463,204 - ybaV b0442 0.12 -1.9
463,205 - ybaV b0442 0.12 -1.0
463,205 - ybaV b0442 0.12 +1.4
463,288 - ybaV b0442 0.34 -3.0
463,303 + ybaV b0442 0.38 +0.7
463,438 + ybaV b0442 0.74 -0.8
463,465 + ybaV b0442 0.82 +1.1
463,473 - ybaV b0442 0.84 +0.5
463,483 - ybaV b0442 0.87 +0.6
463,518 + -0.7
463,590 + -0.4
463,608 + -1.0
463,655 + -0.8
463,655 + -1.0
463,761 + ybaW b0443 0.34 -2.4
463,761 + ybaW b0443 0.34 +1.1
463,775 - ybaW b0443 0.37 -0.7
463,775 - ybaW b0443 0.37 -1.7
463,826 - ybaW b0443 0.50 -0.5
463,879 + ybaW b0443 0.63 +0.1
463,879 + ybaW b0443 0.63 +0.4
463,897 - ybaW b0443 0.68 +0.7
463,911 + ybaW b0443 0.71 -0.2
463,920 - ybaW b0443 0.74 -2.4
463,920 - ybaW b0443 0.74 +0.5
463,977 + ybaW b0443 0.88 +0.9
463,977 + ybaW b0443 0.88 +2.9
463,977 + ybaW b0443 0.88 +1.9
463,977 + ybaW b0443 0.88 -0.4
463,979 - ybaW b0443 0.88 +1.3
463,986 + +0.3
463,986 + +0.4
464,035 + -0.1
464,035 + -0.4
464,209 - ybaX b0444 0.19 -1.1
464,209 - ybaX b0444 0.19 -0.1
464,226 - ybaX b0444 0.22 -0.9
464,230 + ybaX b0444 0.22 -1.8
464,287 - ybaX b0444 0.30 -0.7
464,332 - ybaX b0444 0.37 -0.5
464,332 - ybaX b0444 0.37 -1.6
464,344 - ybaX b0444 0.39 +0.0
464,346 - ybaX b0444 0.39 +0.6
464,346 - ybaX b0444 0.39 +1.2
464,433 - ybaX b0444 0.51 -0.4
464,433 - ybaX b0444 0.51 +2.1
464,511 - ybaX b0444 0.62 +0.5
464,511 - ybaX b0444 0.62 +0.7
464,523 + ybaX b0444 0.64 -0.2
464,523 + ybaX b0444 0.64 -1.2
464,551 + ybaX b0444 0.68 +1.7
464,553 - ybaX b0444 0.69 -1.4
464,553 - ybaX b0444 0.69 -2.1
464,557 - ybaX b0444 0.69 +1.5
464,557 - ybaX b0444 0.69 +0.1
464,559 - ybaX b0444 0.69 -0.0
464,569 + ybaX b0444 0.71 +0.8
464,579 + ybaX b0444 0.72 -2.3
464,582 - ybaX b0444 0.73 -0.9
464,589 - ybaX b0444 0.74 +1.1
464,594 - ybaX b0444 0.74 -0.1
464,675 - ybaX b0444 0.86 +1.5
464,708 - -0.1
464,772 + +1.3
464,772 + +0.9
464,803 + +1.3
464,926 + -0.7
464,969 + -1.6
464,969 + +1.5
464,977 - +0.9
464,977 - +0.9
465,058 + ybaE b0445 0.13 +1.2
465,143 - ybaE b0445 0.18 +1.3
465,180 + ybaE b0445 0.20 +0.3
465,181 + ybaE b0445 0.20 +1.1
465,181 + ybaE b0445 0.20 +0.1
465,194 - ybaE b0445 0.21 +1.0
465,194 - ybaE b0445 0.21 -1.7
465,196 - ybaE b0445 0.21 +1.0
465,246 - ybaE b0445 0.24 +0.4
465,290 + ybaE b0445 0.27 +0.5
465,293 - ybaE b0445 0.27 +0.2
465,307 - ybaE b0445 0.28 -0.9
465,449 - ybaE b0445 0.36 +1.1
465,530 + ybaE b0445 0.41 +0.7
465,538 - ybaE b0445 0.41 +1.7
465,539 + ybaE b0445 0.41 +1.1
465,550 + ybaE b0445 0.42 -0.2
465,556 - ybaE b0445 0.42 -3.0
465,594 + ybaE b0445 0.45 +0.9
465,594 + ybaE b0445 0.45 +0.6
465,594 + ybaE b0445 0.45 -0.4
465,643 - ybaE b0445 0.47 -0.7
465,667 + ybaE b0445 0.49 -0.3

Or see this region's nucleotide sequence