Experiment: LB Aerobic with Irgasan 0.0000003125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybhS and ybhF overlap by 8 nucleotides ybhF and ybhG overlap by 8 nucleotides ybhG and ybiH overlap by 1 nucleotides
b0793: ybhS - predicted transporter subunit: membrane component of ABC superfamily (NCBI), at 825,342 to 826,475
ybhS
b0794: ybhF - putative ATP-binding component of a transport system (VIMSS), at 826,468 to 828,204
ybhF
b0795: ybhG - hypothetical protein (NCBI), at 828,197 to 829,195
ybhG
b0796: ybiH - putative transcriptional regulator (VIMSS), at 829,195 to 829,866
ybiH
Position (kb) 826
827
828
829 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 825.609 kb on - strand, within ybhS at 825.609 kb on - strand, within ybhS at 825.609 kb on - strand, within ybhS at 825.645 kb on + strand, within ybhS at 825.662 kb on + strand, within ybhS at 825.736 kb on + strand, within ybhS at 825.742 kb on - strand, within ybhS at 825.808 kb on + strand, within ybhS at 825.834 kb on + strand, within ybhS at 825.834 kb on - strand, within ybhS at 825.895 kb on + strand, within ybhS at 825.895 kb on + strand, within ybhS at 826.064 kb on - strand, within ybhS at 826.064 kb on - strand, within ybhS at 826.131 kb on + strand, within ybhS at 826.137 kb on - strand, within ybhS at 826.137 kb on - strand, within ybhS at 826.468 kb on - strand at 826.616 kb on - strand at 826.632 kb on - strand at 826.632 kb on - strand at 826.648 kb on + strand, within ybhF at 826.648 kb on + strand, within ybhF at 826.691 kb on - strand, within ybhF at 826.757 kb on + strand, within ybhF at 826.757 kb on + strand, within ybhF at 827.035 kb on + strand, within ybhF at 827.246 kb on - strand, within ybhF at 827.246 kb on - strand, within ybhF at 827.256 kb on - strand, within ybhF at 827.256 kb on - strand, within ybhF at 827.256 kb on - strand, within ybhF at 827.288 kb on - strand, within ybhF at 827.288 kb on - strand, within ybhF at 827.464 kb on + strand, within ybhF at 827.470 kb on + strand, within ybhF at 827.547 kb on - strand, within ybhF at 827.549 kb on + strand, within ybhF at 827.549 kb on + strand, within ybhF at 827.554 kb on + strand, within ybhF at 827.881 kb on + strand, within ybhF at 827.906 kb on - strand, within ybhF at 827.949 kb on + strand, within ybhF at 828.002 kb on - strand, within ybhF at 828.002 kb on - strand, within ybhF at 828.069 kb on + strand at 828.073 kb on - strand at 828.130 kb on - strand at 828.143 kb on + strand at 828.156 kb on - strand at 828.197 kb on + strand at 828.197 kb on + strand at 828.205 kb on - strand at 828.207 kb on - strand at 828.311 kb on - strand, within ybhG at 828.410 kb on - strand, within ybhG at 828.469 kb on + strand, within ybhG at 828.502 kb on - strand, within ybhG at 828.504 kb on + strand, within ybhG at 828.528 kb on - strand, within ybhG at 828.528 kb on - strand, within ybhG at 828.620 kb on - strand, within ybhG at 828.725 kb on - strand, within ybhG at 828.876 kb on + strand, within ybhG at 828.906 kb on - strand, within ybhG at 828.949 kb on - strand, within ybhG at 828.953 kb on + strand, within ybhG at 828.959 kb on - strand, within ybhG at 828.959 kb on - strand, within ybhG at 828.978 kb on + strand, within ybhG at 828.978 kb on + strand, within ybhG at 829.047 kb on - strand at 829.088 kb on - strand, within ybhG at 829.093 kb on - strand, within ybhG
Per-strain Table
Position Strand Gene LocusTag Fraction LB Aerobic with Irgasan 0.0000003125 mM remove 825,609 - ybhS b0793 0.24 +0.6 825,609 - ybhS b0793 0.24 -0.1 825,609 - ybhS b0793 0.24 +0.3 825,645 + ybhS b0793 0.27 -0.5 825,662 + ybhS b0793 0.28 -2.3 825,736 + ybhS b0793 0.35 +0.4 825,742 - ybhS b0793 0.35 -1.9 825,808 + ybhS b0793 0.41 -2.0 825,834 + ybhS b0793 0.43 +0.3 825,834 - ybhS b0793 0.43 +0.0 825,895 + ybhS b0793 0.49 -1.4 825,895 + ybhS b0793 0.49 -0.7 826,064 - ybhS b0793 0.64 -0.2 826,064 - ybhS b0793 0.64 +1.1 826,131 + ybhS b0793 0.70 -1.6 826,137 - ybhS b0793 0.70 +0.1 826,137 - ybhS b0793 0.70 -1.4 826,468 - -2.5 826,616 - -1.7 826,632 - +0.9 826,632 - +0.3 826,648 + ybhF b0794 0.10 -1.4 826,648 + ybhF b0794 0.10 -1.4 826,691 - ybhF b0794 0.13 -1.4 826,757 + ybhF b0794 0.17 -0.7 826,757 + ybhF b0794 0.17 +1.9 827,035 + ybhF b0794 0.33 -1.3 827,246 - ybhF b0794 0.45 +0.9 827,246 - ybhF b0794 0.45 +0.0 827,256 - ybhF b0794 0.45 -0.7 827,256 - ybhF b0794 0.45 -2.3 827,256 - ybhF b0794 0.45 +1.1 827,288 - ybhF b0794 0.47 -1.6 827,288 - ybhF b0794 0.47 -3.0 827,464 + ybhF b0794 0.57 +0.5 827,470 + ybhF b0794 0.58 +0.8 827,547 - ybhF b0794 0.62 -0.4 827,549 + ybhF b0794 0.62 -1.9 827,549 + ybhF b0794 0.62 -0.1 827,554 + ybhF b0794 0.63 +0.0 827,881 + ybhF b0794 0.81 +0.4 827,906 - ybhF b0794 0.83 -1.1 827,949 + ybhF b0794 0.85 -0.4 828,002 - ybhF b0794 0.88 -1.4 828,002 - ybhF b0794 0.88 -1.1 828,069 + -1.3 828,073 - +1.1 828,130 - -3.6 828,143 + -0.1 828,156 - -0.4 828,197 + -1.2 828,197 + -0.7 828,205 - +0.7 828,207 - -0.0 828,311 - ybhG b0795 0.11 -1.3 828,410 - ybhG b0795 0.21 +0.4 828,469 + ybhG b0795 0.27 -0.8 828,502 - ybhG b0795 0.31 -0.1 828,504 + ybhG b0795 0.31 +0.4 828,528 - ybhG b0795 0.33 -0.8 828,528 - ybhG b0795 0.33 -0.8 828,620 - ybhG b0795 0.42 -0.8 828,725 - ybhG b0795 0.53 -0.6 828,876 + ybhG b0795 0.68 -0.5 828,906 - ybhG b0795 0.71 +0.7 828,949 - ybhG b0795 0.75 -0.7 828,953 + ybhG b0795 0.76 +0.9 828,959 - ybhG b0795 0.76 -0.0 828,959 - ybhG b0795 0.76 -1.1 828,978 + ybhG b0795 0.78 -0.7 828,978 + ybhG b0795 0.78 -2.1 829,047 - +1.9 829,088 - ybhG b0795 0.89 -0.6 829,093 - ybhG b0795 0.90 +0.4
Or see this region's nucleotide sequence