Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF828

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
10,063	-		GFF827	0.21	+0.8
10,390	+		GFF827	0.47	-0.5
10,394	+		GFF827	0.47	+0.0
10,468	+		GFF827	0.53	-2.2
10,590	-		GFF827	0.63	+0.1
10,610	+		GFF827	0.64	-0.0
10,610	+		GFF827	0.64	-1.5
10,677	-		GFF827	0.70	-0.6
10,810	+		GFF827	0.80	-0.2
10,821	+		GFF827	0.81	+0.1
10,954	+				-1.1
11,003	-				-1.9
11,068	-				-1.3
11,102	+				+1.8
11,110	+				-1.1
11,111	-				-0.2
11,371	+		GFF828	0.31	+0.2
11,372	-		GFF828	0.31	-0.8
11,558	+		GFF828	0.49	-2.0
11,559	-		GFF828	0.49	+1.1
11,652	+		GFF828	0.59	-0.7
11,731	+		GFF828	0.67	-1.3
11,739	+		GFF828	0.67	-2.2
11,869	-		GFF828	0.80	-1.1
12,131	+				+0.5
12,133	+				-0.3
12,134	-				+0.3
12,317	-		GFF829	0.87	-1.9
12,390	-				+0.3