Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF518

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
248,153	+		GFF517	0.52	+0.0
248,162	-		GFF517	0.52	+0.3
248,238	+		GFF517	0.56	-0.2
248,295	+		GFF517	0.59	+0.5
248,329	+		GFF517	0.60	+0.0
248,659	+		GFF517	0.77	+1.0
248,720	-		GFF517	0.79	-0.2
248,736	+		GFF517	0.80	+0.2
248,737	-		GFF517	0.80	-0.1
248,935	+				-0.6
248,936	-				-0.4
249,192	-				-0.7
249,649	+		GFF518	0.66	+0.4
249,874	-				+0.2
249,922	+				-1.5
249,951	-				+0.2
249,997	-				-0.0
250,222	+		GFF519	0.16	-0.4
250,280	-		GFF519	0.20	-0.3
250,312	-		GFF519	0.22	+0.1
250,418	-		GFF519	0.30	+0.8
250,418	-		GFF519	0.30	+0.3
250,432	+		GFF519	0.31	+0.3
250,570	+		GFF519	0.41	-0.4
250,597	+		GFF519	0.42	+0.2
250,726	+		GFF519	0.52	-0.6
250,727	-		GFF519	0.52	+0.8
250,815	-		GFF519	0.58	-0.3