Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4772

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
78,840	+		GFF4771	0.44	+0.2
78,852	-		GFF4771	0.45	+0.2
78,995	+		GFF4771	0.67	+0.4
79,033	-		GFF4771	0.73	-0.6
79,227	+				+0.2
79,274	+				-0.9
79,275	-				+0.4
79,577	+				-0.0
79,697	+				+0.1
79,716	+				+0.8
79,788	+		GFF4772	0.41	-1.2
79,906	+				+0.4
79,907	-				-0.1
80,263	-				-0.2
80,341	-		GFF4773	0.11	-0.4
80,341	-		GFF4773	0.11	-0.5
80,391	+		GFF4773	0.13	+0.4
80,488	-		GFF4773	0.17	+0.4
80,494	+		GFF4773	0.17	-0.0
80,501	-		GFF4773	0.17	+0.0
80,606	-		GFF4773	0.21	+0.6
80,634	-		GFF4773	0.22	-0.0
80,768	+		GFF4773	0.27	-0.5
80,794	+		GFF4773	0.29	-0.8
80,798	+		GFF4773	0.29	-0.3
80,798	+		GFF4773	0.29	-0.8