Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4742

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
48,865	+				-0.1
49,619	+				-1.3
49,890	+		GFF4742	0.15	+0.2
49,919	-		GFF4742	0.17	-0.6
50,004	+		GFF4742	0.22	-1.1
50,004	+		GFF4742	0.22	+0.3
50,005	-		GFF4742	0.22	-0.1
50,191	+		GFF4742	0.33	-0.6
50,298	-		GFF4742	0.40	-0.3
50,445	-		GFF4742	0.48	-0.1
50,452	+		GFF4742	0.49	+0.1
50,463	+		GFF4742	0.50	-1.3
51,902	+				+0.9
51,932	-				-0.1
51,976	+				+0.3
51,994	+				+2.2
52,199	-		GFF4744	0.21	-0.2
52,228	+		GFF4744	0.23	-0.7
52,228	+		GFF4744	0.23	-0.3
52,228	+		GFF4744	0.23	+0.2
52,233	+		GFF4744	0.24	+0.0