Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4698

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
8,711	-				+1.8
8,732	+				+0.1
8,732	+				+0.2
8,734	+				-0.5
8,734	+				-0.7
8,735	-				+0.3
8,735	-				+0.8
8,781	+		GFF4697	0.14	-0.5
8,951	+		GFF4697	0.31	+0.3
8,954	-		GFF4697	0.31	-0.5
8,970	-		GFF4697	0.33	-0.2
8,998	+		GFF4697	0.36	+1.0
9,142	-		GFF4697	0.51	-0.8
9,233	-		GFF4697	0.60	-0.4
9,233	-		GFF4697	0.60	+0.1
9,579	+				-0.4
9,580	-				+0.2
9,608	-				+0.3
9,618	-				-0.1
9,709	-		GFF4698	0.21	+0.4
9,709	-		GFF4698	0.21	+0.4
9,880	-		GFF4698	0.69	+0.8
9,929	+		GFF4698	0.82	+0.3
10,104	-		GFF4699	0.13	-0.7
10,264	-		GFF4699	0.33	-0.9
10,428	-		GFF4699	0.54	-0.5
10,540	+		GFF4699	0.69	+0.4
10,645	-		GFF4699	0.82	+0.9
10,647	+		GFF4699	0.82	-0.3
10,647	+		GFF4699	0.82	+0.5
10,648	-		GFF4699	0.82	-0.2
10,648	-		GFF4699	0.82	-0.7
10,714	-				+1.1
10,859	+				+0.9
10,860	-				-0.5
10,961	+		GFF4700	0.28	+1.5