Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4641

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
435,882	+		GFF4640	0.64	-3.0
436,334	+				-1.6
436,382	-				-0.8
436,463	-				-0.8
436,522	-				-1.6
436,529	+				-1.7
436,529	+				-1.3
436,704	+		GFF4641	0.21	-1.1
437,064	-		GFF4641	0.52	-2.4
437,283	-		GFF4641	0.71	-3.0
437,367	-		GFF4641	0.78	-2.1
437,620	-				-0.7
437,636	-				-1.6
437,645	-				-3.1
438,095	+		GFF4642	0.54	-0.3
438,096	-		GFF4642	0.55	-2.9
438,572	+		GFF4643	0.42	+0.2