Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4634

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
425,514	+		GFF4633	0.19	-0.3
425,515	-		GFF4633	0.19	-0.2
425,645	+		GFF4633	0.32	-0.5
425,655	+		GFF4633	0.32	+0.1
425,655	+		GFF4633	0.32	-0.4
425,813	+		GFF4633	0.48	-0.4
425,814	-		GFF4633	0.48	-1.0
425,927	+		GFF4633	0.58	+0.1
425,928	-		GFF4633	0.59	+0.2
425,931	+		GFF4633	0.59	+0.8
426,172	+		GFF4633	0.82	-0.1
426,230	-		GFF4633	0.87	+0.7
426,400	-				+0.1
426,400	-				-0.5
426,544	+				+0.4
426,544	+				-2.1
426,697	-		GFF4634	0.15	-1.0
426,697	-		GFF4634	0.15	-1.4
427,066	-		GFF4634	0.44	-1.0
427,115	+		GFF4634	0.48	-1.4
427,134	+		GFF4634	0.50	-0.2
427,135	-		GFF4634	0.50	-0.7
427,247	-		GFF4634	0.58	-0.7
427,520	-		GFF4634	0.80	-1.6
427,720	-				-0.3
427,881	+				-1.4
427,911	-				-1.1
428,016	+				-1.1
428,033	+				-1.2
428,043	-				-0.2
428,051	+				-1.0
428,084	+				-2.4
428,085	-				-1.0
428,085	-				-0.4
428,140	-				-1.0
428,265	+				-1.4
428,265	+				-1.4
428,325	-				-1.1
428,354	+				-0.2
428,389	-				-1.6
428,663	+				-0.6
428,666	+				-1.7
428,666	+				-0.6
428,667	-		GFF4635	0.10	-2.6