Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4368

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
150,145	-		GFF4366	0.79	-1.0
150,234	-		GFF4366	0.84	-0.2
150,615	+				+0.1
150,616	-				-0.5
150,616	-				+0.7
150,717	+				-0.2
150,737	+				+0.3
150,738	-				-0.9
150,738	-				-0.2
150,888	+		GFF4367	0.44	-0.2
150,982	-		GFF4367	0.72	-0.1
150,982	-		GFF4367	0.72	+0.3
151,341	+		GFF4368	0.18	+1.3
151,342	-		GFF4368	0.18	+0.1
151,459	+		GFF4368	0.27	+0.2
151,467	+		GFF4368	0.28	+0.4
151,592	-		GFF4368	0.38	+0.2
151,592	-		GFF4368	0.38	-0.1
151,592	-		GFF4368	0.38	+1.8
151,666	-		GFF4368	0.43	-0.2
151,716	-		GFF4368	0.47	-0.1
151,716	-		GFF4368	0.47	-0.1
151,929	-		GFF4368	0.64	-2.2
151,929	-		GFF4368	0.64	-0.7
152,005	+		GFF4368	0.70	+0.3
152,079	+		GFF4368	0.75	+0.4
152,080	-		GFF4368	0.76	+2.8
152,114	+		GFF4368	0.78	-0.1
152,248	-		GFF4368	0.89	+1.2
152,254	-		GFF4368	0.89	+0.4
152,384	-				+0.2
152,386	-				+0.0
152,424	+				+1.1
152,439	-				-0.4
152,559	-				+0.0
152,614	-		GFF4369	0.14	+0.9
152,615	+		GFF4369	0.14	+0.3
152,616	-		GFF4369	0.14	+0.2
152,616	-		GFF4369	0.14	+0.2
152,616	-		GFF4369	0.14	+0.4
152,658	+		GFF4369	0.19	+0.1
152,658	+		GFF4369	0.19	-0.1
152,659	-		GFF4369	0.19	-0.1
152,659	-		GFF4369	0.19	-0.1
152,659	-		GFF4369	0.19	-0.5
153,100	-		GFF4369	0.70	-0.2
153,354	+				+0.3
153,354	+				+0.2
153,355	-				-0.2
153,358	+				+0.1