Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4335

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
115,459	+				+0.1
115,459	+				+0.1
115,459	+				-0.3
115,459	+				-0.1
115,460	-				+0.1
115,509	+				-0.4
115,521	+				+0.2
115,553	+				+0.2
115,718	-		GFF4334	0.23	-0.0
115,788	+		GFF4334	0.31	-0.1
115,841	+		GFF4334	0.38	-0.1
115,895	-		GFF4334	0.45	-0.2
116,262	+				+0.3
116,306	+				-0.4
116,449	+				+0.3
116,450	-				+0.4
116,454	-				+0.9
116,454	-				+0.3
116,575	-		GFF4335	0.23	-0.1
116,679	-		GFF4335	0.41	+0.5
116,679	-		GFF4335	0.41	+0.8
116,994	-				-1.0
116,994	-				-0.1
117,117	-		GFF4336	0.15	-0.4
117,216	-		GFF4336	0.27	+0.3
117,303	+		GFF4336	0.38	-1.6
117,304	-		GFF4336	0.38	-0.4
117,427	+		GFF4336	0.53	+0.9
117,489	+		GFF4336	0.61	+1.5
117,489	+		GFF4336	0.61	-0.2
117,490	-		GFF4336	0.61	+0.2
117,495	+		GFF4336	0.61	-1.2
117,496	-		GFF4336	0.62	-0.5
117,496	-		GFF4336	0.62	-0.2
117,526	-		GFF4336	0.65	+0.3
117,553	-		GFF4336	0.68	-0.0
117,580	-		GFF4336	0.72	+0.4
117,612	+		GFF4336	0.76	+0.0
117,704	-		GFF4336	0.87	+0.1
117,798	-				+0.0
117,826	+				+0.1
117,826	+				-0.6
117,950	+				-0.3
117,991	+				-0.8
117,992	-				-0.2