Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4249

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
30,302	+		GFF4248	0.67	-0.3
30,302	+		GFF4248	0.67	+0.5
30,303	-		GFF4248	0.67	-0.7
30,303	-		GFF4248	0.67	-0.1
30,347	+		GFF4248	0.69	-1.9
30,349	+		GFF4248	0.69	-1.3
30,350	-		GFF4248	0.69	-0.1
30,429	-		GFF4248	0.72	-0.7
30,514	-		GFF4248	0.76	+0.1
30,780	+		GFF4248	0.88	+0.0
30,781	-		GFF4248	0.88	+0.0
30,784	-		GFF4248	0.88	+0.4
30,818	-		GFF4248	0.89	+0.5
30,915	+				-0.1
30,936	+				+0.0
31,093	-				-0.5
31,204	-		GFF4249	0.28	-1.0
31,268	+		GFF4249	0.42	-2.2
31,268	+		GFF4249	0.42	+0.4
31,534	+				+0.0
31,534	+				+0.5
31,548	-				-0.5
31,692	-		GFF4250	0.40	+0.3
31,806	+				+0.2
31,807	-				+1.8
31,976	-				+0.2
31,996	+				-0.6
32,012	-				+0.2
32,096	+				-0.6
32,096	+				+0.4
32,100	+				+0.5
32,100	+				+0.2
32,101	-				+0.3
32,101	-				-0.3
32,101	-				+0.0
32,101	-				+0.2
32,104	+				+0.2
32,105	-				+0.5
32,204	+				-0.5