Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4232

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
12,794	-		GFF4231	0.60	+0.4
12,859	+		GFF4231	0.63	+0.1
13,034	+		GFF4231	0.70	-1.0
13,078	+		GFF4231	0.71	-0.0
13,078	+		GFF4231	0.71	+0.6
13,078	+		GFF4231	0.71	+2.2
13,079	-		GFF4231	0.72	+0.8
13,079	-		GFF4231	0.72	+0.0
13,100	+		GFF4231	0.72	+0.1
13,107	-		GFF4231	0.73	-1.5
13,145	+		GFF4231	0.74	-1.3
13,149	-		GFF4231	0.74	+0.1
13,149	-		GFF4231	0.74	+0.0
13,150	+		GFF4231	0.74	+0.1
13,254	+		GFF4231	0.78	-1.1
13,259	-		GFF4231	0.79	+0.2
13,259	-		GFF4231	0.79	-0.8
13,362	-		GFF4231	0.83	+0.5
13,578	-				-0.8
13,589	+				+0.0
13,589	+				-2.5
13,622	-				+0.6
13,664	+				+0.8
13,720	+				-0.2
13,756	-				+0.4
13,767	+				-0.2
13,768	-				+0.4
13,811	+				-0.1
13,823	-				-0.5
13,985	-		GFF4232	0.25	-1.1
14,017	-		GFF4232	0.30	-0.5
14,616	+				+0.2
14,617	-				+0.5
14,697	+		GFF4233	0.15	-0.1