Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3601

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
352,990	+		GFF3599	0.87	+0.2
353,467	+		GFF3600	0.67	+0.6
353,937	+		GFF3601	0.44	+0.2
354,003	+		GFF3601	0.53	+0.2
354,053	-		GFF3601	0.61	-0.3
354,277	-				+0.2
354,387	-				+0.4
354,403	+				-0.7
354,644	+		GFF3602	0.34	-0.3
354,792	-		GFF3602	0.49	+2.0
354,850	+		GFF3602	0.55	+0.2
354,906	-		GFF3602	0.60	-0.4
354,986	-		GFF3602	0.68	-0.1
355,203	-				+0.0