Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3415

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
179,741	-		GFF3414	0.32	-2.1
179,877	+		GFF3414	0.41	-2.2
180,128	-		GFF3414	0.58	-3.0
180,153	-		GFF3414	0.60	-4.2
180,153	-		GFF3414	0.60	-1.8
180,174	+		GFF3414	0.61	-2.3
180,177	-		GFF3414	0.61	-2.7
180,255	+		GFF3414	0.67	-2.2
180,305	-		GFF3414	0.70	-3.0
180,365	-		GFF3414	0.74	-2.2
180,561	+		GFF3414	0.88	-2.3
180,736	-				-2.4
180,849	-		GFF3415	0.16	-1.5
180,877	+		GFF3415	0.20	-1.3
181,079	+		GFF3415	0.50	-2.3
181,257	+		GFF3415	0.76	-3.1
181,298	-		GFF3415	0.83	-1.0
181,405	-				-2.3
181,483	+				-0.4
181,541	-				+0.5
181,545	-				+0.3