Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3143

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
148,186	+		GFF3141	0.24	-0.1
148,288	-		GFF3141	0.42	-0.1
148,325	-		GFF3141	0.48	-0.1
148,401	+		GFF3141	0.61	-0.0
148,470	-		GFF3141	0.73	-0.3
148,476	-		GFF3141	0.74	+1.5
148,584	+				-0.1
148,653	+				-0.5
148,654	-				-0.0
148,754	-		GFF3142	0.30	+1.2
148,898	-		GFF3142	0.76	-0.5
148,978	+				-0.3
149,079	+		GFF3143	0.87	+1.2
149,079	+		GFF3143	0.87	+0.6