Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2678

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
200,261	+		GFF2677	0.14	-0.0
200,361	-		GFF2677	0.25	+0.2
200,607	-		GFF2677	0.50	+0.2
200,607	-		GFF2677	0.50	+0.5
200,706	+		GFF2677	0.61	+0.5
200,707	-		GFF2677	0.61	+0.3
200,730	-		GFF2677	0.63	-0.1
200,803	-		GFF2677	0.71	+0.8
200,952	-		GFF2677	0.86	+0.5
201,045	-				+0.1
201,069	+				+0.9
201,069	+				+0.6
201,070	-				-0.6
201,070	-				-0.0
201,075	-				+0.5
201,130	+				-0.2
201,179	+				-0.1
201,181	+				-0.2
201,197	+				-1.0
201,285	+		GFF2678	0.16	+0.2
201,286	-		GFF2678	0.17	+0.1
201,514	-		GFF2678	0.62	+0.4
201,532	-		GFF2678	0.65	-0.4
201,634	-		GFF2678	0.85	-0.0
201,707	-				-0.0
201,743	-				-1.2
201,901	+				+0.2
201,906	-				-0.5
201,948	-				-1.4
202,244	+		GFF2679	0.29	-0.1
202,386	-		GFF2679	0.38	+0.5
202,516	-		GFF2679	0.47	-0.4
202,644	-		GFF2679	0.55	-0.8