Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2565

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
81,429	-		GFF2563	0.59	+2.5
81,669	+		GFF2563	0.81	-0.1
81,751	-		GFF2563	0.88	-0.4
81,956	+				-1.1
82,085	+		GFF2564	0.28	+0.5
82,086	-		GFF2564	0.28	+0.7
82,139	+		GFF2564	0.40	+1.9
82,210	+		GFF2564	0.56	+0.6
82,232	-		GFF2564	0.61	+0.4
82,423	+				-0.0
82,551	-				+1.8
82,579	+		GFF2565	0.10	+0.0
82,728	+		GFF2565	0.20	+0.4
83,150	+		GFF2565	0.49	+0.7
83,450	+		GFF2565	0.69	+0.3
83,453	+		GFF2565	0.69	+0.6
83,457	-		GFF2565	0.69	+0.3
83,771	-				+0.2
83,870	-				+0.0
83,871	+				-0.2
83,885	-				-0.2
83,892	-				+0.1
84,038	+				-1.3
84,384	-		GFF2566	0.61	-0.0
84,384	-		GFF2566	0.61	+0.7
84,523	+		GFF2566	0.85	-0.3
84,523	+		GFF2566	0.85	-0.5
84,524	-		GFF2566	0.85	-0.3
84,527	+		GFF2566	0.85	-0.4
84,527	+		GFF2566	0.85	-0.4
84,528	-		GFF2566	0.86	-0.3
84,531	+		GFF2566	0.86	+0.0
84,804	+				+0.3
84,804	+				+0.3