Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2564

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
80,972	+		GFF2563	0.17	+0.2
81,126	+		GFF2563	0.31	-0.7
81,233	+		GFF2563	0.41	-0.6
81,376	-		GFF2563	0.54	-0.0
81,429	-		GFF2563	0.59	+2.5
81,669	+		GFF2563	0.81	-0.1
81,751	-		GFF2563	0.88	-0.4
81,956	+				-1.1
82,085	+		GFF2564	0.28	+0.5
82,086	-		GFF2564	0.28	+0.7
82,139	+		GFF2564	0.40	+1.9
82,210	+		GFF2564	0.56	+0.6
82,232	-		GFF2564	0.61	+0.4
82,423	+				-0.0
82,551	-				+1.8
82,579	+		GFF2565	0.10	+0.0
82,728	+		GFF2565	0.20	+0.4
83,150	+		GFF2565	0.49	+0.7