Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2530

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
42,954	+				-0.8
43,071	+		GFF2529	0.13	+0.2
43,133	+		GFF2529	0.19	+0.7
43,134	-		GFF2529	0.19	+0.4
43,255	+		GFF2529	0.31	+0.4
43,334	+		GFF2529	0.39	+1.2
43,334	+		GFF2529	0.39	+1.0
43,358	+		GFF2529	0.41	+0.2
43,467	-		GFF2529	0.52	+0.3
43,467	-		GFF2529	0.52	-0.3
44,047	-				+0.9
44,148	-		GFF2530	0.16	+0.3
44,503	-		GFF2530	0.44	-0.4
44,557	-		GFF2530	0.48	+0.3
44,677	+		GFF2530	0.57	-0.9
44,693	+		GFF2530	0.59	+1.6
44,967	-		GFF2530	0.80	+0.4
45,485	+				+0.0