Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2446

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
59,848	+		GFF2445	0.23	-1.0
59,936	+		GFF2445	0.29	-0.0
60,031	-		GFF2445	0.37	+0.1
60,041	-		GFF2445	0.38	-0.2
60,189	-		GFF2445	0.49	+0.3
60,335	+		GFF2445	0.61	+0.6
60,348	+		GFF2445	0.62	+0.2
60,348	+		GFF2445	0.62	-0.1
60,349	-		GFF2445	0.62	-0.2
60,349	-		GFF2445	0.62	+0.2
60,383	-		GFF2445	0.64	-0.2
60,383	-		GFF2445	0.64	+0.1
60,405	-		GFF2445	0.66	+0.2
60,620	+		GFF2445	0.83	-0.4
60,621	-		GFF2445	0.83	-1.5
61,029	-		GFF2446	0.17	-0.8
61,134	+		GFF2446	0.27	+0.6
61,245	+		GFF2446	0.36	+0.4
61,245	+		GFF2446	0.36	-0.0
61,249	+		GFF2446	0.37	+1.7
61,505	-		GFF2446	0.59	+0.2
61,511	-		GFF2446	0.60	+1.1
61,924	+				-0.0
61,925	-				+0.5
61,925	-				+0.1
61,925	-				+0.2
61,934	-				+0.9
62,032	+				-0.4
62,196	-				+0.0