Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2419

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
30,410	+		GFF2417	0.54	+0.2
30,510	+		GFF2417	0.67	+0.1
30,563	+		GFF2417	0.73	+0.6
30,563	+		GFF2417	0.73	+0.2
30,563	+		GFF2417	0.73	+0.1
30,693	+		GFF2417	0.89	+1.0
30,768	-				+0.4
30,992	+		GFF2418	0.35	+0.3
31,055	-		GFF2418	0.45	+0.4
31,405	+				+0.1
31,406	-				-1.0
31,406	-				+0.3
31,607	-				-0.3
31,633	+				-0.2
31,918	+		GFF2419	0.22	-0.6
31,937	-		GFF2419	0.23	-0.2
32,091	-		GFF2419	0.29	+0.6
32,121	+		GFF2419	0.30	-0.9
32,176	-		GFF2419	0.33	+0.2
32,219	-		GFF2419	0.35	-0.5
32,240	+		GFF2419	0.35	-1.1
32,241	-		GFF2419	0.35	-0.2
32,241	-		GFF2419	0.35	+0.1
32,250	+		GFF2419	0.36	+0.2
32,251	-		GFF2419	0.36	-0.3
32,318	+		GFF2419	0.39	+0.6
32,362	-		GFF2419	0.41	+0.5
32,395	+		GFF2419	0.42	+1.0
32,395	+		GFF2419	0.42	+0.5
32,606	+		GFF2419	0.51	+0.1
32,860	-		GFF2419	0.61	+0.3
33,048	+		GFF2419	0.69	+0.4
33,056	-		GFF2419	0.70	+0.1
33,157	+		GFF2419	0.74	+0.5
33,158	-		GFF2419	0.74	+0.5
33,158	-		GFF2419	0.74	-0.3
33,158	-		GFF2419	0.74	+0.2
33,298	-		GFF2419	0.80	-0.1
33,427	+		GFF2419	0.85	+0.0
33,427	+		GFF2419	0.85	+0.2
34,365	+		GFF2420	0.19	+0.3
34,563	+		GFF2420	0.27	+0.3
34,656	+		GFF2420	0.31	+1.7
34,659	-		GFF2420	0.31	-0.7
34,700	+		GFF2420	0.33	-0.2