Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2296

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
83,129	+		GFF2295	0.46	-0.5
83,130	-		GFF2295	0.46	-0.1
83,227	+		GFF2295	0.52	+0.3
83,230	+		GFF2295	0.52	+0.1
83,267	+		GFF2295	0.55	+0.3
83,268	-		GFF2295	0.55	-0.7
83,449	-		GFF2295	0.67	-0.4
83,821	+				-3.1
83,822	-				+0.1
83,842	+				+1.0
83,842	+				-0.2
83,842	+				-0.2
83,843	-				+0.1
83,843	-				-0.5
83,844	+				+0.0
83,844	+				+1.7
83,844	+				+0.1
83,845	-				-0.2
83,845	-				-0.2
83,897	+				-0.6
83,906	+				-0.5
83,906	+				-0.1
84,013	-				+0.7
84,044	+				+1.2
84,147	+		GFF2296	0.18	+0.6
84,209	+		GFF2296	0.24	-0.5
84,241	-		GFF2296	0.27	+0.7
84,243	+		GFF2296	0.28	+0.2
84,244	-		GFF2296	0.28	-0.3
84,355	-		GFF2296	0.38	+0.1
84,469	+		GFF2296	0.49	+0.2
84,841	-		GFF2296	0.85	+0.1
84,922	+				+1.1
85,043	+				+1.0
85,298	+		GFF2297	0.30	+0.2
85,323	+		GFF2297	0.33	-0.0
85,407	+		GFF2297	0.41	+0.2
85,557	+		GFF2297	0.56	+0.2
85,636	+		GFF2297	0.64	+0.8
85,636	+		GFF2297	0.64	+0.1
85,780	+		GFF2297	0.78	-0.2