Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2173

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
20,016	-		GFF2172	0.45	-0.2
20,300	+		GFF2172	0.67	+0.0
20,301	-		GFF2172	0.67	-0.5
20,301	-		GFF2172	0.67	-0.3
20,462	+		GFF2172	0.79	+0.4
20,691	+				+0.2
20,774	+				-0.1
20,955	+		GFF2173	0.21	-2.6
20,955	+		GFF2173	0.21	-1.4
20,955	+		GFF2173	0.21	-1.7
20,955	+		GFF2173	0.21	-0.7
20,956	-		GFF2173	0.22	-1.9
20,957	+		GFF2173	0.22	-1.9
20,957	+		GFF2173	0.22	-1.2
20,961	+		GFF2173	0.22	-0.9
21,183	+		GFF2173	0.53	-1.0
21,251	-		GFF2173	0.62	-1.1
21,760	+		GFF2174	0.58	-0.1
21,761	-		GFF2174	0.58	-0.1
21,889	-				-0.0
21,964	-				+0.3
21,984	-				-0.0
22,104	+		GFF2175	0.11	-1.2
22,209	+		GFF2175	0.18	+0.9
22,275	-		GFF2175	0.22	+0.2