Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF181

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
171,949	+		GFF180	0.22	+0.9
172,668	+				+0.3
172,721	-				-0.0
173,073	+		GFF181	0.24	-1.0
173,077	+		GFF181	0.25	-0.2
173,288	-		GFF181	0.54	-0.3
173,506	-		GFF181	0.85	-0.0
173,554	+				-0.2
173,623	+				+0.0
173,623	+				-0.0
173,924	-		GFF182	0.11	-0.6
174,016	+		GFF182	0.15	+0.3
174,017	-		GFF182	0.15	-0.6
174,077	-		GFF182	0.18	-1.6
174,077	-		GFF182	0.18	-0.2
174,152	+		GFF182	0.21	-0.5
174,193	+		GFF182	0.23	-0.3
174,193	+		GFF182	0.23	-0.0
174,194	-		GFF182	0.23	-0.5
174,194	-		GFF182	0.23	+0.5
174,194	-		GFF182	0.23	-1.0
174,245	+		GFF182	0.25	+0.0
174,246	-		GFF182	0.25	-0.5
174,246	-		GFF182	0.25	-0.0
174,331	-		GFF182	0.29	-0.0
174,349	+		GFF182	0.29	-0.2
174,380	-		GFF182	0.31	+0.5