Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF179

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
170,220	-		GFF178	0.47	-0.3
170,342	-		GFF178	0.55	+0.5
170,914	-				-0.7
171,158	+				+0.1
171,225	+		GFF179	0.10	+1.0
171,297	+		GFF179	0.21	-1.7
171,404	-		GFF179	0.36	+0.4
171,434	+		GFF179	0.40	+0.2
171,737	-		GFF179	0.84	+0.3
171,835	+				-0.1
171,836	-				+0.3
171,836	-				+0.1
171,856	+				+0.2
171,949	+		GFF180	0.22	+0.9
172,668	+				+0.3
172,721	-				-0.0